| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1053 |
|---|
| Symbol | |
|---|
| ID | 6274057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1256369 |
|---|
| End bp | 1258792 |
|---|
| Gene Length | 2424 bp |
|---|
| Protein Length | 807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642613104 |
|---|
| Product | outer membrane protein assembly complex, YaeT protein |
|---|
| Protein accession | YP_001877660 |
|---|
| Protein GI | 187735548 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTC CCGTTTTTTT GTATGTTTCC TTTCCCTTGA TAGCATGTTC GGCTGTTTTG
GCCCAGGATG AAACTTCCCT TAACAGAGGC GCCTATGGTT CCGTGATGAC TCCGGAACAG
GTAATGCGGG AACTGGGGCC GGGCACGGGG CTTCTTCCCG GTGACCAGGC GTATGAGGGG
CGGCCTGTGA AGAGCGTTTC CGTGCGGTAC AGAAGCACCG GCAAGACCGT GTCCGAAGAC
CGTCTGAAAA ATTTGCTGGC TACGCAGCCG GGCACCAGTT ATTCCCCGGA AGTGGTCAAC
AAGGACTTGG AACGGTTGTT GGAAAGCGGT CTGGTAGGCG GCAATACAAC AGTAGCCGTG
GAGCCTTCCG GCGACGGCGT GGCGGTGGTG TTTGAAATGG CGGCCCAGAA TCTGCTGGGC
GGCGTGGGGT TCCGCGGCAA TACCGCGTTC GACAACAGGG ACCTCTCCGA GGAATGCGGG
CTGAAGGGGG GGGAAGCTCT CAGCGACAAG GCCCTGAGCA GCGCTATTGC CAAGCTGCGC
ACTTATTACC AGGAAGCCCG GTATCCGGAT GTACGTGTTT CCTATTTTTA CCAGAAAACG
GAACGGCCCG GCTTTGTGGA TGTGGTCTTC GACATTAACG AAGGAAAAAA GGCCAATATT
ATCAAGATTG ACTTTGTGGG CAATGAACAC ATCAGCGCCA AGGATCTCCG ACAGGTGATG
AAAACCAAGG AGAAGGGCTG GTTGACCTGG ATTACCAAAT CCGGACGCAT TGACCGTGAA
CAAGTGGAGG ACGATCTGGC GGAATTGGTG ACTTATTACC GCAATAAAGG TTATCTGCGC
GTCAAGCTGG ACAAGGTGGA ATATTTTGAC GCCGGCAAAG GCAATGAGCA GAAGCTGACG
ATGAGAATTA CCCTTACCGA GGGGCGCCGC TACAAGGTCA ACCAGGTTGC CTTCGGCCCC
ACCAAGGTGT TTACGGCCCA GGAACTGATT CCTGGCCTGA GCATGTACAA CGGGGATACC
TATTCCGCCC AGAAAGTGGC CGACGACGTG ACGATGATCC GCCGTTATTA CGGTTCCCGG
GGGTATGCGG ACGCCTCCGT GCGTCCGGAC ATTCAGGAAG TGGGCGTTGA TCCCAAGACA
GGTTACGGAC AAATCAACAT CGTGTACCAT GTGACGGAAG GCAATCCCTA CCGCGTAGGC
AATATCCGCC TGACCGGGAA TAACCGCACG AAGGATTACG TCATCCGCCA GGAACTTCCC
CTCCAGTCCA ATGACCCCAT GAACGCCGTG GATTTGGATA CCGCCCAGAA GCGCCTCCAG
AACCTGAACT ATTTTGACAT GGTGGACGTA GCCCAGGTGG GATCCACGCG ACCCGGCTAC
CGTGATATCA ATATCGAGGT GGCGGAAAAA CGTACGGGGT CCCTGAATAT CGGCGTGGCA
TTTTCCTCTA TTGAAAGCGT TTACCTGTTC GCAGGCATCA CCCAGTCCAA TTTTGACATG
TATGACTGGT CCTCTTTCGT GGGCGGCGGC CAGCGTTTCG CGATTAACGC CCGTGTCGGT
TTTGAAACGC AGGATGCCAG TATTTCCTGG GTGGATCCGT GGTTCCTGCA CCGCAAGCTG
GCCTTCGGGA CGGAAATCTT CTACAGCAAT TCCACATATT TTTCCGATTA TTACGACCAG
CAGAACTATG GCTTTGCCAT TTCTCTCCGC AAGCCGATCG GGGAACTGGA TTACGTGAAA
CTGGAATACC GCCTGGAACA GTACCGTATT GACGCCGAAG GGAACGCCCC TATCTTCTTC
TGGCAACAGG ACGGAGACTA CCTGCGCAGC CATGTGGAAC TTTCCTACAC CATTGATACC
CGCGACGCGC AGATTTTTCC CCGCAAGGGA GGCAAATTTG AAGTGCTGGC CGGTTATTCC
GGCCTGGGCG GCGATGTGCA TACATACAAT TTCGGCGTGA ATGGCTCCTA TTACTGGAAT
TTGCGCGGAG ACACCATTTT CAGCATCAAT GCCGGTGCGG CTACCGTGGA TTCCTATGGC
AACCACGATG TGCCCATTTT TGAGCGCCTC TACCTCGGCG GGCCATACAA CATGCGCGGT
TTCCGTTTCC GGGACGTGGC GCCGTACAAT CCCGCCCTGA GCGGTGATGA GACGATGGGC
GGCCGTTCCT CCTTCTTCTG CCAGTTTGAA TATTCCATTC CTGTGATTGA AGAAGTGCGC
GTCGCGGTGT TTTATGACAT CGGTTTTGTC AACGGAGATT CTTTTGACTT CAGCACGTCC
AAAATAGTTT CCGACTACGG GATCGGCCTG CGCCTGAACC TGCCCATCGG TCCGCTGGCA
GTGGACTATG CCATTCCGAT TCAGAAGAAC AACGCCATTG ACCGCGGAGG ACAATTCCAG
TTCTATCTCA ATTATTCCTA TTAA
|
|---|
| Protein sequence | MIRPVFLYVS FPLIACSAVL AQDETSLNRG AYGSVMTPEQ VMRELGPGTG LLPGDQAYEG
RPVKSVSVRY RSTGKTVSED RLKNLLATQP GTSYSPEVVN KDLERLLESG LVGGNTTVAV
EPSGDGVAVV FEMAAQNLLG GVGFRGNTAF DNRDLSEECG LKGGEALSDK ALSSAIAKLR
TYYQEARYPD VRVSYFYQKT ERPGFVDVVF DINEGKKANI IKIDFVGNEH ISAKDLRQVM
KTKEKGWLTW ITKSGRIDRE QVEDDLAELV TYYRNKGYLR VKLDKVEYFD AGKGNEQKLT
MRITLTEGRR YKVNQVAFGP TKVFTAQELI PGLSMYNGDT YSAQKVADDV TMIRRYYGSR
GYADASVRPD IQEVGVDPKT GYGQINIVYH VTEGNPYRVG NIRLTGNNRT KDYVIRQELP
LQSNDPMNAV DLDTAQKRLQ NLNYFDMVDV AQVGSTRPGY RDINIEVAEK RTGSLNIGVA
FSSIESVYLF AGITQSNFDM YDWSSFVGGG QRFAINARVG FETQDASISW VDPWFLHRKL
AFGTEIFYSN STYFSDYYDQ QNYGFAISLR KPIGELDYVK LEYRLEQYRI DAEGNAPIFF
WQQDGDYLRS HVELSYTIDT RDAQIFPRKG GKFEVLAGYS GLGGDVHTYN FGVNGSYYWN
LRGDTIFSIN AGAATVDSYG NHDVPIFERL YLGGPYNMRG FRFRDVAPYN PALSGDETMG
GRSSFFCQFE YSIPVIEEVR VAVFYDIGFV NGDSFDFSTS KIVSDYGIGL RLNLPIGPLA
VDYAIPIQKN NAIDRGGQFQ FYLNYSY
|
|---|
| |