| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1044 |
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| Symbol | |
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| ID | 6274068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1247713 |
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| End bp | 1248414 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613093 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_001877651 |
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| Protein GI | 187735539 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.114234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACCA AACGCAGCAA GCGATATCAA GAAGCAGCCA AGCTTGTTAC CCCTAACAAG
AACTACAGCA TCACGGAAGC CGTGGAAACC ATGAAATCCT TCCCGGCACC GAAATTCGAC
CCGACCGTCA CCGTCTCCTT CCATCTGACT GTGGACCCCC GCAAATCCGA CCAGATGGTT
CGCGGCAGCG TTTCCCTGCC TAACGGCACG GGTAAAAACG TCCGCGTCCT CGTCTTCGCC
CAGGGCGATG CCGCCAAGGC CGCCCAGGAA GCCGGAGCCG AATTCGTGGG GTTTGAAGAT
CTCATCAAGA AAGTCCAGGG AGGATTTGTT GACTTTGATA CGGCCATTGC CACCCCCGAC
GCCATGACGG AGGTTCGCAA GGTTGCCCGT GTACTGGGTC CGCGCGGCCT GATGCCCAAC
CCGAAAACCG GTACCGTCAC GGACGATACG GCCAAGGCTG TGAAGGAAGT GAAAGCCGGC
CGCGTTGACT ACAAGGTTGA CAAGAACGCC AATATCTCCG CCGCTGTAGG CAAGCTGTCT
TTCTCCAACG AAAGCATCGC CGAAAACATC GCTGCCCTGA TTGATTCCGT CGTCAAGGCC
CGCCCGGCTT CCGCCAAGGG CGCCTACATC GAATCCGTCA CCGTTTCATG CGCCATGTGC
CCCGGTCTGC CGGTTGACAC CGCTTCCATC GCCAAACTGT AA
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| Protein sequence | MSTKRSKRYQ EAAKLVTPNK NYSITEAVET MKSFPAPKFD PTVTVSFHLT VDPRKSDQMV
RGSVSLPNGT GKNVRVLVFA QGDAAKAAQE AGAEFVGFED LIKKVQGGFV DFDTAIATPD
AMTEVRKVAR VLGPRGLMPN PKTGTVTDDT AKAVKEVKAG RVDYKVDKNA NISAAVGKLS
FSNESIAENI AALIDSVVKA RPASAKGAYI ESVTVSCAMC PGLPVDTASI AKL
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