Gene Amuc_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1043 
Symbol 
ID6274069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1247188 
End bp1247691 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content60% 
IMG OID642613092 
Productribosomal protein L10 
Protein accessionYP_001877650 
Protein GI187735538 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.144449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTG ACAAGCGTAT CATCATTGAC GACCTGACCG CTCGCGTCAA CGCCTCCCCG 
TTCCTGATCG TCGTGGACTA CACCTCGATC ACCGTGCCTG AGTTCACCAA TCTGCGTTCC
GCCCTGGCCG CCTGCGGCGC TCAGTGCCAC GTAGCCAAGA ACAACTTCAT GCGCACGGCT
CTGACGGATG CCGGCCTTCC CGACATCGGG GAACACCTCG TCGGCCAGAC CGCTTTCGTG
ACCGGCGCAT CCGACGTAGC AGGCGCCGCC AAGGCCATCA ACACCTTTGC CAAGGCTTCC
AAGAAAGCCG AATACAAGGT GGCGATCCTG GATGGAGCCA TTCTTTCCGC GGACGAAATC
CGCGCCATCG GCGAACTGCC TCCCCGCGAC CAGTTGCTTG CCAAACTCCT TGGCACTATC
AACGCGGCCG GTTCCGCTCT TGCCCGAGTT ATTCAGGCAT ATGTGGACAA AGAAAACGGC
GGCAGCGAAG AACCCGCCGC CTAA
 
Protein sequence
MNPDKRIIID DLTARVNASP FLIVVDYTSI TVPEFTNLRS ALAACGAQCH VAKNNFMRTA 
LTDAGLPDIG EHLVGQTAFV TGASDVAGAA KAINTFAKAS KKAEYKVAIL DGAILSADEI
RAIGELPPRD QLLAKLLGTI NAAGSALARV IQAYVDKENG GSEEPAA