Gene Amuc_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1042 
Symbol 
ID6274071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1246655 
End bp1247029 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content58% 
IMG OID642613091 
Productribosomal protein L7/L12 
Protein accessionYP_001877649 
Protein GI187735537 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATA TTAACAAAAT CGCTGAAGAA CTCGGCACCC TTACCATCCT GGAAGCTGCC 
GACCTCGTCA AGCTTCTGGA AGAAAAGTGG GGCGTTTCCG CCGCTGCTCC CGTAGCTGCC
GCCGGCGCTG CCGCCGCTCC TGCCGAAGCT GAAGAAGAAA AGACCGAATT CAACGTCGTT
CTGACGGAAG CCGGCGCCAA CAAGATTGCC GTAATTAAGG CCGTCCGCGA AGTGAAGGCC
GGCCTCGGCC TGGTGGACGC CAAGAAACTG GTTGAAGGCA CTCCCGCCGT CATCCTGGAA
GCTGTCTCTA AGGACGAAGC TAACGCCGCC AAGGCCAAGC TGGAAGAAGC TGGCGCCAAG
GTAGACGTCA AGTAA
 
Protein sequence
MADINKIAEE LGTLTILEAA DLVKLLEEKW GVSAAAPVAA AGAAAAPAEA EEEKTEFNVV 
LTEAGANKIA VIKAVREVKA GLGLVDAKKL VEGTPAVILE AVSKDEANAA KAKLEEAGAK
VDVK