| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0933 |
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| Symbol | |
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| ID | 6274232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1110496 |
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| End bp | 1111998 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612987 |
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| Product | preprotein translocase, SecY subunit |
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| Protein accession | YP_001877546 |
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| Protein GI | 187735434 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.262242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCCG CATTTGCAAA CTCCATGAAA GTACCGGAGC TCAGGCGCCG GATTTTGTTC
ACACTGGCGA TGATTGTCGT CGTCCGCCTG GGGGTACAGA TTCCCCTGCC GGGCATTGAC
GTCATGGAGC TGCAGAAAGT GATTGAAGCC TCCGCGAACG CCAGCGGTCC CGGAGCGGGT
CTGGCTACCG TGCTGACCAT TTTCTCCGGC GGCGGCCTCC AGCAGTGCGG CATTTTTGCT
TTGGGCATCA TGCCCTACAT TTCCGCTTCC ATCATGACCC AGCTCCTTTC CGCGGTGGTT
CCCCAGTGGG CCAAGATGGT GCGGGAAGAA GGCGGCCGCC AGAAAATGAC CAAGTGGACG
CGCGCCATCG CCATCGTCAT TGCCCTTGTG CAGGGCTGGT TTCTGGTCGG CACGCTAGAA
CACCCGGAAC GCCTGCAGGC CGTGGGTCTC AACATTCCCG CGGACTGCCA GCTTGTCATT
GACCCCGGCA TCCAGTTCGC CCTCATGACG GTGCTCATTA TGGTGGCGGG CACCATGTTC
CTGATGTGGA TAGGCGACCA GATTACGGAA CGCGGCGTCG GCAACGGCGT TTCCCTCATC
ATTTCCGTCA ACATTATTCA CGCCCTTCCG GGAGCAGTCA CCCTGGCCTG GAAAACCCTG
GTGTACAAGG ACGGCGCGGT TGTCCCCATG GGAGCCATGC TGCTCGTGGC CCTGATTGCC
TTCCTGATTG TCGTGGTGGC GCTCGTCGTG ACGGTGACGC AGGCCCAGCG GCGCATTCCC
GTGCAGTACG CCAAGCGGGT CATGGGCAAT AAAATGTTCA ACGGTGCCAC GCAGTACCTG
CCTCTCAAGC TTAACTACTC CGGCGTGATG CCCGTCATTT TCGCTACGGC CATCCTCTCC
CTTCCGCAGG TTCTCTTCTC CCAGATCGCC CACTACAACA CTACGCTGCA GTGGATCGCG
ACCAAGATGA ATGACTGGCT GAATCCCGCT TCTTCCGGCT ATTACATTAT TTCCGGCCTC
ATGATTTTCT TCTTCTCCTA CTTCTGGGTG GCGACCATGT TCCAGCCCTC CCAGATCGCG
GAAGACCTGA AGCGCAATGG CGGCTATATT CCCGGCATCC GTCCCGGCCC CCCCACCGCC
CTCTTCCTGG ACCAGACCAT GCAAAGGCTG ACCTTTGCCG GGTCCGCATT CCTGACCCTC
ATTTACTTCC TGCCTTCCCT GCTGAATATC GGGGGCAATA TCCCCTACCT GGTTACCCAG
TTCTTCGGAG GCACCAGCCT TCTCATTCTG GTGGGCGTAC TGCTTGACAT GATGCGCCAG
GTGGAAACGA CCCTTCTTTC CCGCAATTAC GACGGCTTCC TGAAAAAAGG CAAGCTCAAG
GGCAAATACG GGCACATCCA AGGTACCGGC GCCGCCGCGG GCAGCCGCAC CGTTACCGTC
ATGTGGATTG TTATCGCTCT GCTTGTGCTG GCCGGAGCCA TCGCCTACAA CGCCATGCAG
TAA
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| Protein sequence | MISAFANSMK VPELRRRILF TLAMIVVVRL GVQIPLPGID VMELQKVIEA SANASGPGAG
LATVLTIFSG GGLQQCGIFA LGIMPYISAS IMTQLLSAVV PQWAKMVREE GGRQKMTKWT
RAIAIVIALV QGWFLVGTLE HPERLQAVGL NIPADCQLVI DPGIQFALMT VLIMVAGTMF
LMWIGDQITE RGVGNGVSLI ISVNIIHALP GAVTLAWKTL VYKDGAVVPM GAMLLVALIA
FLIVVVALVV TVTQAQRRIP VQYAKRVMGN KMFNGATQYL PLKLNYSGVM PVIFATAILS
LPQVLFSQIA HYNTTLQWIA TKMNDWLNPA SSGYYIISGL MIFFFSYFWV ATMFQPSQIA
EDLKRNGGYI PGIRPGPPTA LFLDQTMQRL TFAGSAFLTL IYFLPSLLNI GGNIPYLVTQ
FFGGTSLLIL VGVLLDMMRQ VETTLLSRNY DGFLKKGKLK GKYGHIQGTG AAAGSRTVTV
MWIVIALLVL AGAIAYNAMQ
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