| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0888 |
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| Symbol | |
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| ID | 6274279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1057369 |
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| End bp | 1058181 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642612943 |
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| Product | transcriptional regulator, MerR family |
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| Protein accession | YP_001877502 |
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| Protein GI | 187735390 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00108118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAC AGAATTTACT AACCATCGGC AATCTGTCCA AACAGACCGG CGTACATGTC
AAATCCCTCC GGTATTATGA ACAACTGGGC ATTTTGCTCC CGGCCTATAC GGACCCGGAC
ACCGGCTACC GTTACTACAC TCTTTCCCAG ATTCCCGTGG TGGATGCCAT CCGCGCCTGC
ATTTTCCTGG ATATTCCCCT GAAGGAATTT ACCGGCTTCC TGACCAGGGA CCAGCGAAGG
ATCCATTATA AGAAACTTTT CTCCCACGGC ACCATGCTGG CACACCGGAA AATCAGGGAT
ATTCAGGAAA AGCTGCGCCT GCTGGAAAAA TTCCGGAAAC AGATGGGCCG GGAAGAAGAT
CTTCTGCTTC ATGGGGAACA GGCCATCCAC GCATTGCCGG AAAAATACTG CTGGGTGGCG
CCCTATGCGG GAAAACAGCA TACTCCGGAA TTTAACATTC TTATCACCCG CATCTTTGAC
GATATTAACC GCTGCCAGCT GCGGCTGGGC GCGGAAGCCG GCCTGCTTTC CTTCCACCGG
AAAGCAGGGA CGGAGCAGTT CCTGTATGTG GAGGTGGAAG CGGCCGGCAG AGACGCCCGG
CGGATGAAGG AAATCATGCG CCTGCCCGCC GCCTCCTTTC TCTGCGTCAT CAGGCAGGAA
AGCGGCATTG CGGAGGCGCC CGGCGTTTTT CCGGACCTTT TTGCGCAGGA ATATGATAAA
ATCATTATGG AGACGGAATT GTTTCCCGGA GATTACGATG TGGCAAATCC CAAATTCGAA
CTGAGATGCA GCCTGCCGCC GGGTGGGAAA TGA
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| Protein sequence | MDKQNLLTIG NLSKQTGVHV KSLRYYEQLG ILLPAYTDPD TGYRYYTLSQ IPVVDAIRAC
IFLDIPLKEF TGFLTRDQRR IHYKKLFSHG TMLAHRKIRD IQEKLRLLEK FRKQMGREED
LLLHGEQAIH ALPEKYCWVA PYAGKQHTPE FNILITRIFD DINRCQLRLG AEAGLLSFHR
KAGTEQFLYV EVEAAGRDAR RMKEIMRLPA ASFLCVIRQE SGIAEAPGVF PDLFAQEYDK
IIMETELFPG DYDVANPKFE LRCSLPPGGK
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