| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0863 |
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| Symbol | |
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| ID | 6274305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1029953 |
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| End bp | 1032187 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612918 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_001877477 |
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| Protein GI | 187735365 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCT TTGCCTTTTC AAAAAATGGA TGGAAAAAAT ACTTTCTGTT GCCGGTCCTT
TCCATGCTTT CCGCAGGAAC TTCCGTTTCC GGGGCTTCCG CAGACTGGAA TGAAAAGACC
ATCCGGGACA ATCTTCAGCT GGTGGCGGAA TGGCAGGCGA AGCATCCCAA AAAACGTTCG
CCGCTGCATT GGACTTACGG TGCTTTTTAT TCCGGCCTGG TGCAATATGG CCTGTCCGTT
CCGGAAGGGC CGGGGCTGCC GTTGCTGAGA AAAGCGGGAG AAGAGCAGGG GTGGAAGACC
CTGAACCGGC ATTATCATGC GGACGACCAT GCCGTGGGGC ATGCCTGGAT GGAGATGGCG
ATGGAAGACG GCAATCCCGC CGCAGCTGAA AAGATCCGCG CCGTGCTGGA CAAGGTGATG
AACCGGCCTT CCTCCGCTTC CCTCCAATTC CTGACTCCGG GCTGCCAGGA CCGCTGGAGC
TGGTCGGACG CCCTGTTTAT GTCCCCTCCC GTGTTCGTGA AACTGGCGGC CTATACCGGA
GACCGCCGTT ATCTGGAGTT TATGGATAGG GAATACAAGC TTACCTGCGA CTATCTTTTT
GACCGGGAGG AGGGCCTGTT TTTCCGGGAT TCCCGCTATT TTACCGTTCC GGCGGCAAAT
GGGAAAAAGA TGTTCTGGAG CCGGGGCAAC GGCTGGGTGA TTGCCGGATT GCCTCTTATT
TTGCAGGACA TGCCTGCGGA CTGGCCTTCC CGCCCCTTTT ATGAAGACTT GCTTAAACGT
CTGGCGGCAG CCCTGAAAAA ATGCCAGTCG CCCGACGGTT CCTGGCATGC GAGCCTGCTG
GATCCGGACG AACCTCCCTT GAAAGAGATG AGCGGCACCC TCTTTATCAT GTACGGGATG
CTGTGGGGAG TGAACCAGGG ATATCTGGAT GCGGATGAAT ACCTTCCCTC CATCTGTAAG
GCCTGGAAGG CCGCCTGTGA TGCGGTCAGC AAGGAGGGCG CGCTGGGATG GGTACAGCCT
ATTGCGGACA AGCCGGGCCA TTATTCCGGG AAAGATACGG AGGTGTACGG CGCAGGGGCC
TACCTGATGG CCGGGAGTGA GTTGCGTAAA TATGTCATTG ACCGGGATCA TCCGCAGAAG
AAGACCGTGA CCGTTACGAA TCCCCTGGGC AGGTTCCGCC CTGCTGAGAC CGTGTCGGTT
CCATGGCCGT CCGGAGGTTC CGGTGATGCC GCCGGCCTTC GCGTTTTTGA CGTCCGTCAC
GGACGTGTTA TCCCGCATCA GCTGGCGGAT ACGGATGGTG ACGGAACAAC GGATACCCTT
TTGTTCCAGA GCAATTTCCG GCCCGGAACG GTTCGTGATT TCTGGATTCT GGAGAATTCC
TGCCTGGGCG AAGCTCCTTC CGCGGATGTC TGTTTCAGCC GTCCGGTACC GGAGCGGCTG
GATGATTTCG CATGGGAAAA TGATCTTACG GCGCACCGGA TTTACGGTCC GGCCGTCGCC
AGGCCTGCCC CTGAGGGAGA GGGCCTGGTT TCCAGTGGGA CGGATGTATG GAGCAAGCGC
GCGGGCACTC CCGTTATCAA TGAATTTTAC AAACGGGGGG ATTACCACCG GGATCACGGT
CGGGGACTGG ATATGTACAA TGTAGGTCCG GGGCGGGGCT GCGGCGGCAT TGCCGTGTTC
AGGGATGGAA AACCGCATGT GTCCGGAAAC TGGGCCAGCG CCCGGACATT GTACAATGGC
CCGGTCCAGA CCGCTTTTGA GGTGGTTTAT GCACCGTGGG ACATTGGCGG CGGCGTGCGT
GTGGCGGAGA CGCGGAGGGT GACGCTGGAT GCGGGAAACC GTTTCTCCAA AGTCCGCAGC
GTCTTGAACG TCCGGGGGGC TGAAACGGTG AAGGCCGGTG TGGGAATGGA TACCGGAAAG
CGCAGAAATG ATTATGAAGC GGTTATGGAG GACCGGGAGT CCGGCGGCCT GATGACCGCA
TGGAGCAGGC CCCGGAAGGA TGACGGATGC CTGGGAACCG CCGTAATCGT GCCCTGGGTT
CCGGAAGGCC GTGCGGTGGA TGCGGAAGGC TGTACCTACT TGCTCAGGAA GGTCGCGAAC
GGAGAACCCT TTGAATGGTA CATGGGGGCG GTTTGGGACA AGGCTTCTCC CATTCGGTCC
GCTGCCGGCT GGGAAGCGGA GGCTCGCCGT GTCCGGGAGT GCATCGGCCA TCCACTGCAA
GTCCGGGTGC GGTAG
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| Protein sequence | MRFFAFSKNG WKKYFLLPVL SMLSAGTSVS GASADWNEKT IRDNLQLVAE WQAKHPKKRS
PLHWTYGAFY SGLVQYGLSV PEGPGLPLLR KAGEEQGWKT LNRHYHADDH AVGHAWMEMA
MEDGNPAAAE KIRAVLDKVM NRPSSASLQF LTPGCQDRWS WSDALFMSPP VFVKLAAYTG
DRRYLEFMDR EYKLTCDYLF DREEGLFFRD SRYFTVPAAN GKKMFWSRGN GWVIAGLPLI
LQDMPADWPS RPFYEDLLKR LAAALKKCQS PDGSWHASLL DPDEPPLKEM SGTLFIMYGM
LWGVNQGYLD ADEYLPSICK AWKAACDAVS KEGALGWVQP IADKPGHYSG KDTEVYGAGA
YLMAGSELRK YVIDRDHPQK KTVTVTNPLG RFRPAETVSV PWPSGGSGDA AGLRVFDVRH
GRVIPHQLAD TDGDGTTDTL LFQSNFRPGT VRDFWILENS CLGEAPSADV CFSRPVPERL
DDFAWENDLT AHRIYGPAVA RPAPEGEGLV SSGTDVWSKR AGTPVINEFY KRGDYHRDHG
RGLDMYNVGP GRGCGGIAVF RDGKPHVSGN WASARTLYNG PVQTAFEVVY APWDIGGGVR
VAETRRVTLD AGNRFSKVRS VLNVRGAETV KAGVGMDTGK RRNDYEAVME DRESGGLMTA
WSRPRKDDGC LGTAVIVPWV PEGRAVDAEG CTYLLRKVAN GEPFEWYMGA VWDKASPIRS
AAGWEAEARR VRECIGHPLQ VRVR
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