Gene Amuc_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0833 
Symbol 
ID6274343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp984634 
End bp984987 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content47% 
IMG OID642612883 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_001877447 
Protein GI187735335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.64172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA TAAAAAATAA TAAAATCATC GTTCGCAAGG AAGACGCATC GAAGAAAGTG 
TTCAAGGGCG TTTCACTGGA TTCGCTCGCT GTCGGAGAGA AATCAATGGT AGCAAAGATG
AACTATGTGA AAGGCAACTT CGCCTCCACC CACCAACATC CGCATGAACA ATGCGGGTAC
GTCATTTCAG GCGAATACCG CCTGAACATG GAAATGCCGG AGGAGAATAT TGAAGTGCTG
CTTCATGCAG GGGACAGCTA CGCCATACCG GGCAATACGC CTCATTCCTT TGAGGTGATG
GAAAGCGGAG AGGTTGTCGA TGTGTTCACA CCGCCAAGGA AGGACTATTT GTAA
 
Protein sequence
MEIIKNNKII VRKEDASKKV FKGVSLDSLA VGEKSMVAKM NYVKGNFAST HQHPHEQCGY 
VISGEYRLNM EMPEENIEVL LHAGDSYAIP GNTPHSFEVM ESGEVVDVFT PPRKDYL