| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0708 |
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| Symbol | |
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| ID | 6273885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 834204 |
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| End bp | 836183 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612760 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001877326 |
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| Protein GI | 187735214 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.310243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATA CCCCCCCAGA TTTGACTCCG GAACAGGTTT CTCCGGAGCC GGCGCCCAAA
AAACGTATTA TCCGCAAAAC CAAGTCTGCG GCGGAAGCTC CGGTAAAGCC CCAGACTGCT
GCGGAAGTGC CCGGGACGGA ACAGGATTCT TCCCCGGCGC CCCGCAAGCG GACGATAAGG
AAGAAGGTTG CTGAATTGGC GGATGATGGG ATGGAAAGTG TCGATGTGCC GGGGAAGAAG
ACTTCCCGTA AGAGCAGTGC TGAAATCCCG GTGGAAGAAG CGCAGGATGT TCCTGCCAGG
CCCCGGCGCG GACGCCCGCG CAAGAAGCCT GTGGAGGAGG TTCCGGAAAC TGACGGCTCT
GCGATTGTCT CCGGAACGGA AGCCGCCGTC AAGCCGGTGC GCAGGCGTGC TGCCAAGGCT
GTTGCTCCGG AGAACGGTGA TTCAGCCGGC CCTGAGGCGG AAATTGCCGT TCATGCGGCG
CCTGCCGAGC CGGCTTCCGA TTCTTCCGAT TCTGTTCCGG AGCAGCCCGC AGAAGGCAGG
CCGAAGGTTA TTCGCCAGAG ATTTGTGAGG AAACCGAGGG AACAGGAGCC GGAGGCGGAT
GCTTCCGTTC CGTCCATCAA GGTGGTGCAG GAAGGTGCGG CGGATTTTTC CGAAGATGCC
GCCCGGGAGC CGCGTCGGAC AAATGAGTCG CAAAGGCAGC GTTTTGACAG GCAGAACCGC
CGGAATAACA ACGACCGTTT CAACAAAAAC CGGAATAACC GCCAGGATGG CCGCAATGGC
AGAAACGGCA ATGACCGGGT TAAAAACCGC TGGAATAATA ATCAGGAGGG CGGAACCCCA
CAGAACAGCG CCCCCCGTGA ACTGGCGCCG CCGGAACCGG TGGACGGGTT GCTGGAAATT
ACGAATAAGG GGTTCGGCTT TTTAAGGAAG CCGGATAATG ATTTTGACGC TTTTGCGGAA
GCCGTTTATG TGCCGCAGGA TATGATCCGC AGGTTCGGTC TGCGTCCTGC CGTGTGGGTG
CATGGGCAGG CCTGCCGTCA TGACCGCGGC ATTCTTCTGA CGGAAATTGC CTCCGTTAAC
GGGGTTGCTC CGGAGAGAGC GCGCAAGAAC CCGCACTTTG AAGAGCTCAA GGCGGTCAAT
CCTAATAAGC GCATTTCTTT TGAAACCCGG CCGGAGCGTT ACACCACCCG CACATTGGAT
CTGATTGCTC CAATCGGGCG CGGCCAGCGC GGCCTGATTG TCTCTCCGCC CCGCGCAGGG
AAGACGACGC TGCTTCAGCA CATGGCGGAA GCCATTCTGG AGAATTACAG GGATTCCATT
CACCTGATGG TGCTTCTGGT AGACGAGCGT CCGGAAGAAG TGACGGAGTT TAAACGTTCC
CTCCCCGGAG CTGAAGTATA CGCTTCTTCC AATGATGGAA GGGTGCGCGA TCACTGCCGC
ATGGCGGAAC TTTGCATTGA ACGCGCCAAA CGGCTTGTAG AGGCGGGGCA GCATGTTTTC
CTGCTGATGG ATTCCATTAC TCGCCTGGCC CGCGCCTACA ATAACGCTGA CAAGGGAAGC
GGCCGCACGA TGTCCGGCGG CATTGATGCC CGCGCTCTGG AAATGCCCCG GCGCCTTTTT
GCCGCCGCCC GCAATACGCG CCAGGCCGGT TCCCTGACTA TCATTGCCAC CGCCCTGGTG
GAAACCAACA GCCGCATGGA TGACCTGATT TTCCAGGAAT TCAAGGGGAC GGGCAATATG
GAACTTGTGC TGAACCGCCG CATTGCGGAG CAATATATCT TCCCGGCCGT GGACATTCTG
AAATCGGGGA CGCGGAGGGA AGAGCTCATT ATGCCGGAAG CATGGCTGTA CAAGATGAAT
CTGATCCGCC GCGCTTTAGC CGGGCATAAA CCCGTAGAAG CCATGGAACG GTTCCTGTTT
TTCCTGAACA AATACCCCAG CAATACCCAG ATGCTGCTGG ATTTGAAACA GAAAGCGTAG
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| Protein sequence | MSDTPPDLTP EQVSPEPAPK KRIIRKTKSA AEAPVKPQTA AEVPGTEQDS SPAPRKRTIR
KKVAELADDG MESVDVPGKK TSRKSSAEIP VEEAQDVPAR PRRGRPRKKP VEEVPETDGS
AIVSGTEAAV KPVRRRAAKA VAPENGDSAG PEAEIAVHAA PAEPASDSSD SVPEQPAEGR
PKVIRQRFVR KPREQEPEAD ASVPSIKVVQ EGAADFSEDA AREPRRTNES QRQRFDRQNR
RNNNDRFNKN RNNRQDGRNG RNGNDRVKNR WNNNQEGGTP QNSAPRELAP PEPVDGLLEI
TNKGFGFLRK PDNDFDAFAE AVYVPQDMIR RFGLRPAVWV HGQACRHDRG ILLTEIASVN
GVAPERARKN PHFEELKAVN PNKRISFETR PERYTTRTLD LIAPIGRGQR GLIVSPPRAG
KTTLLQHMAE AILENYRDSI HLMVLLVDER PEEVTEFKRS LPGAEVYASS NDGRVRDHCR
MAELCIERAK RLVEAGQHVF LLMDSITRLA RAYNNADKGS GRTMSGGIDA RALEMPRRLF
AAARNTRQAG SLTIIATALV ETNSRMDDLI FQEFKGTGNM ELVLNRRIAE QYIFPAVDIL
KSGTRREELI MPEAWLYKMN LIRRALAGHK PVEAMERFLF FLNKYPSNTQ MLLDLKQKA
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