| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0687 |
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| Symbol | |
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| ID | 6273928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 809148 |
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| End bp | 812282 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612739 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_001877305 |
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| Protein GI | 187735193 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGG CGGCTGTTAT CGCCTGCCTT GGCAGTTTCT CCGTTGCTAC GGCAGCTGAC
TATGCAGTCA ACAGTGCCGA TGAATTCGTT ACGGCCTGGA ACCAGGCTGC CGCTTCCAAT
GAAGCTTCAA CCATCACGAT TACCGTACCT TCCGGCTCCG ATAATATTAC GCTGACCCAA
GAGCAACGAG CCCAGTTGAA CGCCATCTCC GGAACGGGCA ACGTCACCAT TCAAATGACG
GACGCCAGCA ACAAACTGGT TAATTTCAAT TACGATCTGG TTAACAACCA AGTCAGTTTC
AACGACGTCA CCTTGAGTGA ACCTCTGGGA AGCGACAATG ACATTGTGGT GACGAATGCT
TCAAATACCA CAACTATTGA TGGCAGGAAT ATTGCCATCG AAGGTACGAA TGATGCTGCC
AATCCCAAGA CGGTGGGAGC CACCGTCACC TCCACGAACG GACAGGTAGG CATCGGCGAC
AATGTTTCCA TGGAAAAAGC CGTTACCGTC ACCGGCCAGG CAGCTCAAAC CGTAGATCCG
GCAACGCCGC CGACCGGCCA AGCCTATACC AAGACGACGT ACAATACTTA CAATAATTCC
AACGAACAGG CCGTGGTCCT GGGCAACAAC GTCACGATGC AGGATACCGT AACGGCGACA
GGCCAAATCG TAAGCGATCC GGCATCCAAG GTTGCGCTGA ACGGAGATGT GACCTCCACA
GCGGGAATCG GAACCGTAAC TACGGAACAG TTTGACGCCT CCAACGCCCA GACCGGCAAA
ACCGTCATCG ACTCTATGGA TGACAGCGTC TCCGGCGGCA TCATTCTTGG AGAAACCACA
GCCGGGGCCG TCACCCTCAA AACTGAGGGC GGCAATATTT CCCTGGGAGA CAATTCCGTC
CTGGATGGCA CTACTGTTTC CGCAGAATCC GCCGACCTGA ACAAAACCGT TTACAGCAAT
GACGGCGGCA GCTGGAATAC CGTCGCAAGC ACTGAAAAGC TGGGCACCAT CGAAGGCAGC
GTCACGCTGG GTGAAAATAC TACCGTCAAG GGAAATTCCA CCCTGACAGC GGATGACAAT
ATCGCCATCG GCAACAACAG CGTCATCACC GGCAATACCG CCGCTGACGG CGTGATCTCC
GCAGGTGGCC AGATTTCCAT CGGGGACGGT ACCCAGGTCT TGGATAACAC CGCCACCAGC
GACGGCAAAG CCGCCATCAA CCTGGCGGAC GGGCAAACCC TGTACATCGG CTCCGGAGCA
ATCCTTTCCG GCAATACTTC CAACGGCGTT TCCGGTTCCG TGCAGGCTGG CCAAAACACC
CAGATCAACG TTTATACGGA CGCCACCGCC TATACCTTCA TCAATGACGG CATCTCCACC
ACGGCCGCCG CTTCCACGGC TGACGCCGCT CCGCTGGCTG CTGACCAGAC CGTCATGACG
AAGACCGGAG CGGGAACTCT CGTTTACGGC GGCACAGGAA CCACCGATAC GTTCGGAGGA
ACCTACCAGC AGCTTGAAGG CAACCTGATC ATCGGCCATG CCACCTTCGG CGCCGTTGAC
TCCGCCACCG GAGAAGTCGG TCCGCTCCAG TCCATTGACG GCGCCGTAAT GGGGACGGAC
GATACTGTTT ACGACATTCG GACGGGACAG GTGACCCTGG CGAAGAATTC CACCATGAAG
GGAGCTTCCG CCACTTTCGG AGGCGATTCT ACCTTGCTGC TGAGCGACGG GTCCGTACTG
GACTTCGGCA CTCCCGCCAC GTTCCAGGAT AATTCCCGCG TAGGCATCCA GGTATCCGAC
GCCAGCGGCA ATCCCGTTCC GCTCGCCCAA CTCCGCAAGG GGACGGAAAG CGTGACGGTC
ACGCTGAACG GCACGGACAT TTCCGGACGC CTGCTGAACA ACGTATTTCT GAGCACCACC
ATGGCTCCGG GAACGGCGGA AGGCACCACC ACCATCACCC AGGATATGAA GGGCATTGAC
GGCCCCATGT CCGGCTACAA CGGCAACGTT TACACCGTAG CGGCCGCTCT GGAAAACAAC
CGTCTGAATG TGGCCGCCGG TTCTCCCGCC GCCCAGTTCT ATGAAAACCT GTTCCGGGCC
ACGAGCGCGG ATGAAGCGGC CCGCATCATC CAGTCCGTCA GCGGTGAACA CGTGGTGAAC
TTCACCTGGG CAGCCAGCCG CACCGTGCGG AACTTCGCCG ACCTGGGGCG CATTCAATCC
GCCGCCTCCA TGGCACGCCA GACGGAAGAC ACCGTTGAAG TAGTGGACGC CAAGGGTTCT
CCGATCGCCC GCAAGACAAT CGCCAGAGGC AACGGCAATA TCTGGGTGGG CGGCATGGGA
ATCTGGGATG ACCAAGATGC CCGCGACGGT GTTTCCGGGT ATAAGTATAA TGCCGGCGGT
TATGCCGTAG GCATTGACTA CAAAGCCGCT CAAGGTTCCC TGATCGGCAT CGCCGCCGGT
CAAAGCTTCG GCAGCTTCAA GGATAAGACA GGCATCGGCG CCGACTACGA CGTCGATTCC
TTCCTGGCCA TGATTTATGG ACGCATGCAT CCCTTCAGGG ACAGCAAGTT CACTCTGGAC
GGCTACGGCG CCTACGGACG TTCCCGTTTC AAAGGTGATT CCTACATCAT GGGGTCTGCC
GCCAACGGCA GAGCAGATAC GGACACCTTC AGCGGCGCCC TTTACGGCAC CTGGACGGAA
CGTTTCGCAC TCGGCAGGGC CTTTATAACA CCTTACACGG GTATTGAGTT CATGACTTCC
GAACTCAAGG GATTCTCTGA AAGCGGACCT TATGGGCGCA CCTTCGGCCA CGCCCGGGCC
CAGAACTGGA CCATTCCTGT CGGCATTACG ATCGCCCGCG CCTACCAGAC GGACGGAGGC
ACCACCATCA CCCCGGCCTT GACGGTAGCC GTATCCCAGG ATGTGAGCCG CATGAATCCG
AAATCCAATG TCGCCGGCCC CCTCGGAACC TGGAACGCCC GCGGCGTCAA TGTTGGCCGC
ACCGCATTCC GTTTGAATGC CGGCATTGAT GTGCTCTTCT CCAACCAGTG GGGAGCACGC
GTCTGCTACC AGTTCGAGAC CCGCAACAAG CTGACCGCCC ACGGTATCAA CGGCGCCCTC
AGCTATACGT TCTAA
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| Protein sequence | MLLAAVIACL GSFSVATAAD YAVNSADEFV TAWNQAAASN EASTITITVP SGSDNITLTQ
EQRAQLNAIS GTGNVTIQMT DASNKLVNFN YDLVNNQVSF NDVTLSEPLG SDNDIVVTNA
SNTTTIDGRN IAIEGTNDAA NPKTVGATVT STNGQVGIGD NVSMEKAVTV TGQAAQTVDP
ATPPTGQAYT KTTYNTYNNS NEQAVVLGNN VTMQDTVTAT GQIVSDPASK VALNGDVTST
AGIGTVTTEQ FDASNAQTGK TVIDSMDDSV SGGIILGETT AGAVTLKTEG GNISLGDNSV
LDGTTVSAES ADLNKTVYSN DGGSWNTVAS TEKLGTIEGS VTLGENTTVK GNSTLTADDN
IAIGNNSVIT GNTAADGVIS AGGQISIGDG TQVLDNTATS DGKAAINLAD GQTLYIGSGA
ILSGNTSNGV SGSVQAGQNT QINVYTDATA YTFINDGIST TAAASTADAA PLAADQTVMT
KTGAGTLVYG GTGTTDTFGG TYQQLEGNLI IGHATFGAVD SATGEVGPLQ SIDGAVMGTD
DTVYDIRTGQ VTLAKNSTMK GASATFGGDS TLLLSDGSVL DFGTPATFQD NSRVGIQVSD
ASGNPVPLAQ LRKGTESVTV TLNGTDISGR LLNNVFLSTT MAPGTAEGTT TITQDMKGID
GPMSGYNGNV YTVAAALENN RLNVAAGSPA AQFYENLFRA TSADEAARII QSVSGEHVVN
FTWAASRTVR NFADLGRIQS AASMARQTED TVEVVDAKGS PIARKTIARG NGNIWVGGMG
IWDDQDARDG VSGYKYNAGG YAVGIDYKAA QGSLIGIAAG QSFGSFKDKT GIGADYDVDS
FLAMIYGRMH PFRDSKFTLD GYGAYGRSRF KGDSYIMGSA ANGRADTDTF SGALYGTWTE
RFALGRAFIT PYTGIEFMTS ELKGFSESGP YGRTFGHARA QNWTIPVGIT IARAYQTDGG
TTITPALTVA VSQDVSRMNP KSNVAGPLGT WNARGVNVGR TAFRLNAGID VLFSNQWGAR
VCYQFETRNK LTAHGINGAL SYTF
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