| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0600 |
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| Symbol | |
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| ID | 6274705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 709686 |
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| End bp | 710834 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642612651 |
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| Product | integrase family protein |
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| Protein accession | YP_001877218 |
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| Protein GI | 187735106 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTGC CGAACATTTT GATTAATAAA CGACTATTTT TGCTTGACTA CGGATTCCGA
AACCGTTGCA AAATAGATGA AATGAAAGAG GAAATTTTAG CAACGGATCA TGCGGCGCTG
GCCATTTTGA AAAAGACAGG GCTGGATGTG GTGGAAGCCG CCCAGCTGGC GCATGAATTG
CTGCAGGCCA GCAAGGGGCG CGGCAACCGA TGGAAGAGGG CAAGGGAATG CATCCGGCTG
GGAGAGGAGG CCCTGGTTGC CAGAGGAAAA ACCGTGGCGT TCAGGAAAGC CGTGGATGAG
GCCATGGAGG CCCGGCAAGA TCGCAGGAAA AGAACCAGGG ATGATTTCCG TTATATCAGC
CGGCGGTTGT TGAGGTTTTG TCCGGAAATG GCCCGGCGGC CCGTGCGCTT TATCACGCCT
CGGGAATGCC GCGCCTGCCT GGAAAAATCA TTTGATACCC TCAGGCAGAG GCATAAGGCC
CGGTTGGTGC TCAGCGGTAT TTTCGGAACG GCTGTGAAAC GCGGCTGGTG CACGGAAAAC
CCGGTGGCGT ATGTGGATCT GCCGAGGCTG AAGGAGCATT CCATTCCCGT GCTGTCCCTG
GAAGAAATGC GCCGGTTGCT GGCTGCGGCG GAAGAGTATG ACGGAGGGGC GTGCCTGGCT
GCGGTTGGGC TGATGCTGTA TGCCGGCATC CGCCCGGAAG AAGTGAGAAG GCTGGATTGG
GCACAGATTA ATTTAAGGGA GGGAATGGTT TCCCTGAGGG CGCGCCACAG CAAGACGGGA
GGAGCCCGCA TCGTGACGAT CCGGCCGGTT TTGGGAAATC TGCTGGAAAG AGCGGTTGCT
ATGGGATTTG TGTCGGGAAG CGTATGCCCG CGCAACTGGC CGGCGAAGTG GAGGGAGCTG
AGACGGTTGG CCGGGTGGGA CGGGAAGGAA AAGAAGTGGC CTGCGGATAT GTTAAGGCAT
ACGTTTGCCA GTTATTTTGC CAGGCATTTC AAGAATTTGC ATGTATTGCA GATGGAAATG
GGGCATTCTT CTTCCGATTT GCTGAGGACC AGGTATTTGA ATATGGAAGG CATTACGGAA
ATGACGGCCG CCGTTTTTTG GGGGAACTGC CATGCGGGGC GTCACACCAT TAACAATGGC
CGCCCCTGA
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| Protein sequence | MELPNILINK RLFLLDYGFR NRCKIDEMKE EILATDHAAL AILKKTGLDV VEAAQLAHEL
LQASKGRGNR WKRARECIRL GEEALVARGK TVAFRKAVDE AMEARQDRRK RTRDDFRYIS
RRLLRFCPEM ARRPVRFITP RECRACLEKS FDTLRQRHKA RLVLSGIFGT AVKRGWCTEN
PVAYVDLPRL KEHSIPVLSL EEMRRLLAAA EEYDGGACLA AVGLMLYAGI RPEEVRRLDW
AQINLREGMV SLRARHSKTG GARIVTIRPV LGNLLERAVA MGFVSGSVCP RNWPAKWREL
RRLAGWDGKE KKWPADMLRH TFASYFARHF KNLHVLQMEM GHSSSDLLRT RYLNMEGITE
MTAAVFWGNC HAGRHTINNG RP
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