| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0585 |
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| Symbol | |
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| ID | 6274772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 692337 |
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| End bp | 693953 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612636 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_001877203 |
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| Protein GI | 187735091 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTACT GGAAAAAGGG GTTGGACTTC AGTAGAATGG GGGCCAGCAT TACAATCATG
AGCATACTTT CGGACCGTCT TTCCGAGGAA ATACTGCAAG CCCGCCAGCG CGTCTATACC
GTTGGCGAAC CGACTCCTCT CCAGCGATTG AATCTGCCGG GCATCAAGGC CCCGGTATAC
GCCAAAAGGG AGGATCTGGG GCCCATCCGG GCTTATAAGT GGCGCGGAGC GTTTAATTGC
ATGGCCGCAT TGAGCCAGGA AGCCCGTGAC AAAGGCATTG TGGCGGCTTC CGCCGGCAAT
CATGCCCAGG GCGTGGCGCT GGCGGCCAGA GTGCTGAACT GCCATGCCAC CATTTTCATG
CCGCGCTCCA CGCCGGAAGT GAAGCAGACG GAAGTGCGCC GCCACGGCGG CAGGCATGTG
AAGATCATGC TCCATGGGGA CTGCTATGAC GAGACGGCCG CAGCCGCCCA TGAATACACG
GAAACCCACG GCTGCACTTT TGTCCATCCT TATGACGACC TGGTGACCAT GGCCGGACAG
GGAACGCTGG CGGACGAAGT GGTGATGAGC GGAGAAGGCC CTTTTGACCG CGCGTACGTC
GCCATCGGCG GCGGCGGCCT GGCCGCATCC GTGGCGTGCT GGCTGAAAAA ATTCTGGCCC
CATATCAAGG TCATCGGCGT GGAAGGCATC GACCAGGCGT CCATGAAAAC TTCCATTGAG
CAGGGACGCC GGGTGAATCT GGATTACGTG GATGTCTTCT GCGACGGCAC AGCCGTCCAC
ATCCCCGGAG AATTAACCTA TCCCCTTTGC CGGGAACTGG TTGACGAGTT CGTGACCGTG
ACCAATAATG AGGTCTGCCA GGCCATCCGG GCCATGTGGG AATCCTCCCG CGTCGTGCCG
GAACCATCCG GAGCCATGAG CCTGGCAGGA TTCCTGAAAC AATGGAACCG GGGCGAAGTA
AAGCCGGAGG AAAAGAGTTT CGTGGTCATT TCCGGAGCCA ATATGGATTT CACCCACCTT
ACCCAGATTG CCCGGCAGGC GGGCATCGGC AACCATGAAA CGCGCTATCT GCGCATTTCC
ATGGATTCCA AGCGCGGCCA GGTGCTTAAA TACCTGCGCC ACATTCCGCA GGATACGACG
CTGGTGGATG TGCAATACGG CAAAACGGAG GGAAACACCC AGCACCCCGT GTTCGGCATT
GCCGCTTCCG ATGAAGACCT GGATACCATC CGCACGACAC TGAAAAAGAA AGGAATCGAA
TTCGAAGACA TCAGCGAGGA CGACGACGTG CGCTTCCGCA TGATTCACTA CCAGCCGGAA
CTGTGTCAAC ACCCCCTGTT CGTCCACATT GAATTTCCGG AACGCGCCGG CGCCTTCCTT
GACTTCATGG AACGCATCGC GGATCTGGCT TCCCTCTGTT ATTTCAACTA TACCTACACC
GGGGAACGCG TAGGCCGCGC CCTGGTGGGC ATGGAATTTG ATACAGCGGA AGACCGGGAA
ACCATCCGGA AACGCATGGG CGCCTTTTCC AAAAACATTA TCAGGTCCAT TCGGGAAATT
TCCCCCGAGG CTTTCCAGAG GATTATGGGA AGCAGACAGT TGACAGGCAA TCATTGA
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| Protein sequence | MFYWKKGLDF SRMGASITIM SILSDRLSEE ILQARQRVYT VGEPTPLQRL NLPGIKAPVY
AKREDLGPIR AYKWRGAFNC MAALSQEARD KGIVAASAGN HAQGVALAAR VLNCHATIFM
PRSTPEVKQT EVRRHGGRHV KIMLHGDCYD ETAAAAHEYT ETHGCTFVHP YDDLVTMAGQ
GTLADEVVMS GEGPFDRAYV AIGGGGLAAS VACWLKKFWP HIKVIGVEGI DQASMKTSIE
QGRRVNLDYV DVFCDGTAVH IPGELTYPLC RELVDEFVTV TNNEVCQAIR AMWESSRVVP
EPSGAMSLAG FLKQWNRGEV KPEEKSFVVI SGANMDFTHL TQIARQAGIG NHETRYLRIS
MDSKRGQVLK YLRHIPQDTT LVDVQYGKTE GNTQHPVFGI AASDEDLDTI RTTLKKKGIE
FEDISEDDDV RFRMIHYQPE LCQHPLFVHI EFPERAGAFL DFMERIADLA SLCYFNYTYT
GERVGRALVG MEFDTAEDRE TIRKRMGAFS KNIIRSIREI SPEAFQRIMG SRQLTGNH
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