| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0568 |
|---|
| Symbol | |
|---|
| ID | 6275590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 667693 |
|---|
| End bp | 668124 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642612618 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001877186 |
|---|
| Protein GI | 187735074 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCA TGAATCCGGA GCTGATGTTT CATACGGAAG ATGAAGTCAT GTTTTATGAT
ACGGACTGCG GCGGGGTGGT TCATAACCTG GCCTATTTGC GCATGATTGA GACCTGCCGT
ACCAAACTTG GAGCTAAATT GGGAATGGAT TACAAAACCA TGAGCGATTT GCAGCAGTTT
GCCGTAGTGG TGCGCCATGA GATTGACTAT GTGCGTCCGG CCGTTCTGGG AGACACCATT
TTGACGACGG GATGGCTTCA ATCCGTGGAC CGGGCCCGCT TCTGGTGCGA TTTTGAAATG
AGGCGCGCTT CCAATAATGA TCTTCTGGTC AGGGCTCATC AGCAGCTAGC CCTGGTCCAG
ATGCCGCAGG GGCGTCCTGT GCGTATTCCT GCCGAATGGC GTGCGAGATG GCTGGAATGC
ATGGAATCCT GA
|
|---|
| Protein sequence | MAGMNPELMF HTEDEVMFYD TDCGGVVHNL AYLRMIETCR TKLGAKLGMD YKTMSDLQQF
AVVVRHEIDY VRPAVLGDTI LTTGWLQSVD RARFWCDFEM RRASNNDLLV RAHQQLALVQ
MPQGRPVRIP AEWRARWLEC MES
|
|---|
| |