| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0559 |
|---|
| Symbol | |
|---|
| ID | 6275557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 657464 |
|---|
| End bp | 658756 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642612609 |
|---|
| Product | Argininosuccinate synthase |
|---|
| Protein accession | YP_001877178 |
|---|
| Protein GI | 187735066 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.487039 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG TAGTTGCATA CTCTGGCGGC CTTGACACCT CCGTTCTTCT GAAGTGGCTC
AAGGAAAAAT ATAATGCCGA AATCATCGCC TACTGCGCAG ACGTAGGACA AGCGGAAGAA
CTGGACGGAC TGGAAGCCAA AGCCCTGGCG ACGGGCGCCT CCAAGTGCTT CATCGGCGAC
CTTAAGGAAG ACTTCGCCAC CAACTACATC TTCCCGATGA TACAGGCCAA CGCCCTTTAC
GAAGGCCGCT ACCTGCTGGG AACCTCCATC GCCCGCCCCT GCATTTCCAA AGACATGGTG
GATCTGGCCA TCCGGGAAGG CGCGGACGCC ATCGCCCACG GCGCCACCGG CAAGGGGAAC
GACCAGGTCC GCTTTGAACT GGCCGTCAAT GCCCTGGCTC CGAACATCAA GGTCATCGCC
CCGTGGCGCG ATCCCGAATT CCGCCAGCAG TTCCCGGGCC GCACGGAAAT GATCGCCTAC
GCGGAATCCC ACGGCATCCC GATCCGGCAG TCTCTGAAAA AGCCTTATTC CATGGACCGC
AACCTGCTTC ACATTTCCTT TGAAGCCGGG ATGCTGGAAG ATACCTGGTA CGACGGCACC
ACCCCCGCCG ACCGTGAAAT GTACAAGCTT TCCGTTTCCC CGGAAGATGC TCCGGACCAG
GCCGAATACA TCCAGCTCCT GTATGAAAAG GGCAATGTCA TCGGCATCCA GTACGATGGT
CTCGACGTTC TGCTGAAAGA ACTGGGCGTC AACCCGAAAG GAGAACGCGA CGGGTATACC
CTGCTCAGCC CCCTGGGCGT CATGTACGTG CTGAACGCCC TGGGCGGCAA GCATGGCATC
GGCCGCGTGG ATATCGTAGA AAACCGCTTT GTGGGCATGA AGAGCCGCGG CATTTATGAA
ACTCCCGGCG GCACCATCCT GCTGGCGGCC CACCGCGATA TTGAAACAAT TACAATTGAT
CGGGAAGTGC AAAAGGTGCG CGACTCCCTC ATCCCGGAAT ACGCTACGCT GGTTTACAAC
GGCTTCTGGT TTGCACCGGA ACGCGAGGCC ATCCAGGCCC TGGTAACCAA ATCCCAGGAA
ACCGTCAACG GGGAAGTACG CCTGAAGCTT TACAAGGGCA ACGTCATGTA CGCCGGACGC
CGTTCCCCGC AGTCCCTGTA TTCCGAAGAA ATCGCCACGA TGGAAGGCGG CCACGAGGAA
CTGTACAACC AGAACGACGC GGAAGGGTTC ATCCACCTCA ACGGATTGCG CCTGAAGCAA
TTCAGCCGCG TCAACAAACC CTACGGCAAT TAA
|
|---|
| Protein sequence | MKIVVAYSGG LDTSVLLKWL KEKYNAEIIA YCADVGQAEE LDGLEAKALA TGASKCFIGD
LKEDFATNYI FPMIQANALY EGRYLLGTSI ARPCISKDMV DLAIREGADA IAHGATGKGN
DQVRFELAVN ALAPNIKVIA PWRDPEFRQQ FPGRTEMIAY AESHGIPIRQ SLKKPYSMDR
NLLHISFEAG MLEDTWYDGT TPADREMYKL SVSPEDAPDQ AEYIQLLYEK GNVIGIQYDG
LDVLLKELGV NPKGERDGYT LLSPLGVMYV LNALGGKHGI GRVDIVENRF VGMKSRGIYE
TPGGTILLAA HRDIETITID REVQKVRDSL IPEYATLVYN GFWFAPEREA IQALVTKSQE
TVNGEVRLKL YKGNVMYAGR RSPQSLYSEE IATMEGGHEE LYNQNDAEGF IHLNGLRLKQ
FSRVNKPYGN
|
|---|
| |