| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0530 |
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| Symbol | |
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| ID | 6275284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 622491 |
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| End bp | 624524 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642612580 |
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| Product | transketolase |
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| Protein accession | YP_001877149 |
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| Protein GI | 187735037 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA TCCGCTCATA TTGCCCGGGC ATGAATCTTG ACCTTCTCCA AAAAGCCGCC
AACCAGGCGC GGGGACTCGC CATGGATGCC GTTCACGACT GCGCATCCGG CCACCTGGGC
CTGCCGCTGG GGTGCGCCGA AATCGGGGCC GTCCTGTTCG GCGATTTGCT CAACATCTGC
CCTTCGCAGC CCCGCTGGCT CAACCGTGAC CGCTTCATTC TTTCCGCCGG ACACGGCTCC
ATGTTTCTTT ACGGCTGGCT CCACCTGTCA GGATTCAACA TCGGCATTGA AGATATCAAG
AATTTCCGCC GCAAAGGTTC CATCACGCCC GGCCACCCGG AATTCCGGGA TACGGAGGGT
GTAGAATGCA CCACGGGACC GTTGGGCCAG GGCATTGCGA ACGCCGTAGG CTTCGCCCTC
TCCGCCAGGC GCGCGGCTGC CCGGTTCAAC AGGCCCGGCA TGGATATCTT CACCCAGCAC
GTCTTCTGCC TCACGGGAGA CGGCTGCCTG CAGGAAGGCG TCGCCCGGGA ATCCCTCGCC
CTGGCCGCCG TGCTCAAGCT GGATAACCTT ATTCTCATTT ACGATTCCAA CGACATCACG
CTGGACGCTC CCGCGGAACG CACCCAGCTC ACAGATCCGC GCGCCGTATA CGAAGCCCTG
GGCTGGGATG TGCGCCAGAT TGACGGGCAC GATATCAGGG CCATTGAGTC AGCGGTTGAA
GCCGCCAAAA ACGCCAAAAA CGGGAAACCC CAGCTCATCA TTGCCAAAAC GGTCATCGGC
AAGGGCATTC CCGGCATTGA AGGCACCACA AAAGGCCATG GGGAAGGCGG AGCCAAGCTT
CAGGAAGAAG CGCACGCCAA CTGGGGAATT CCCGCCGGAG AACGCTATTA CGTCTCCGAA
GACGTCCGTA CCGCTTTCGC AAACCTGAAA GCCCAACGGG AAAAAGATTT CAATGCCTGG
AACGCCATGT ATGAACAATG GCGCCGGGCT TATCCGGAAC TGGCAGAGGA ACTGGACGCA
GGCATCAACG CCTGCTCCTG CGGCGTCAAT CCGGCAGACT CGGACAAGGC AATACCGCCC
TTCCCGCAGG ACTATGGCGA TGCTACCCGT TCGGCCGGAG CCGTTGCCAT CAACGCCATC
GCTAAAGCGA ATCCCTGCTT CCTGACCACC AGCGCAGACC TTTACAGCTC CAATAAAAAC
TACCTTTCCG GCGCAGGAGA CTTCTCTGCG GAAACCCCGG AAGGGCGCAA CTTCTGGTTC
GGCATCCGCG AACACGCCAT GGCCGCCATC TGCAACGGCA TTGCCTACGA CGGCCTGTTC
CGCGTAAGCG CCGCCACTTT CTGCGTCTTC GTAGACTACA TGCGCGCCTC CATCCGTGTA
GCCGCCCTCA GCGGACTCCC CGTCACCTAT ATTCTGACGC ATGACTCCGT AGCCGTGGGA
GAAGACGGCC CCACCCACCA GCCGGTGGAA ACAATTTCCG GCCTCCGTGT CATTCCGAAC
CTGGATGTCA TCCGCCCGGC GGACCCGGAA GAAACCGCAG GAGCCTGGAT GGCCGCCATG
CAGCGTGCCG ACGGCCCTAC CGCCCTCATC CTGACCCGTC AGAAAGTGGC TACGCTGAAC
GGAATCCCCG TTGAAACGCG CCGGGAAGGC GTGCTGAAAG GCGCCTACAT CGCCCGGAAA
GAACAGGGAG CCTTGAAAGC CATTATTCTT GCCAGCGGTT CCGAACTGGA ACTGGCTCTG
AAAGCGGCGG AAAAAACAGG GGAAGGAATC CGGGTCGTCT CCATGCCAAG CTTCTGCCGC
TTTGACGCGC AGCCTGCCGA ATACCGGGAA AGCGTGCTTC CCTCCTCCTG CATGAGGAGA
GTTTCCGTAG AAGCCGGAGT CACGGACCTC TGGTGGAAAT ATCTGGGCTG CCAGGGGGAA
GCCGTGGGCA TCAACCGTTT CGGCTTCTCC GCTCCCGGAA CACAGGTGCT GGAAGAACTC
GGCATGAATG TGGACAACGT CGTTGCCGCC GTCCACAAGG TTCTGGCCAA ATAA
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| Protein sequence | MKLIRSYCPG MNLDLLQKAA NQARGLAMDA VHDCASGHLG LPLGCAEIGA VLFGDLLNIC
PSQPRWLNRD RFILSAGHGS MFLYGWLHLS GFNIGIEDIK NFRRKGSITP GHPEFRDTEG
VECTTGPLGQ GIANAVGFAL SARRAAARFN RPGMDIFTQH VFCLTGDGCL QEGVARESLA
LAAVLKLDNL ILIYDSNDIT LDAPAERTQL TDPRAVYEAL GWDVRQIDGH DIRAIESAVE
AAKNAKNGKP QLIIAKTVIG KGIPGIEGTT KGHGEGGAKL QEEAHANWGI PAGERYYVSE
DVRTAFANLK AQREKDFNAW NAMYEQWRRA YPELAEELDA GINACSCGVN PADSDKAIPP
FPQDYGDATR SAGAVAINAI AKANPCFLTT SADLYSSNKN YLSGAGDFSA ETPEGRNFWF
GIREHAMAAI CNGIAYDGLF RVSAATFCVF VDYMRASIRV AALSGLPVTY ILTHDSVAVG
EDGPTHQPVE TISGLRVIPN LDVIRPADPE ETAGAWMAAM QRADGPTALI LTRQKVATLN
GIPVETRREG VLKGAYIARK EQGALKAIIL ASGSELELAL KAAEKTGEGI RVVSMPSFCR
FDAQPAEYRE SVLPSSCMRR VSVEAGVTDL WWKYLGCQGE AVGINRFGFS APGTQVLEEL
GMNVDNVVAA VHKVLAK
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