Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0516 |
Symbol | |
ID | 6273946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 607527 |
End bp | 608639 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642612566 |
Product | hypothetical protein |
Protein accession | YP_001877135 |
Protein GI | 187735023 |
COG category | [S] Function unknown |
COG ID | [COG4299] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.108385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCG CTTCTTCCGT TCCCACCCGT TCTCCCCGCC TGCACTCCCT GGACGCCCTG CGCGGGCTGG ACATGCTCAT TATCCTAGGG CTGGACGCCC TGATTCTGCT TCTGGCCTCC AGAAATCCGG AAAACGGCTT CCTGCAAGAA GCCGCGCGCC AGATGACCCA TGCCCGTTGG GAAGGATTAC ACCTGTACGA TCTGGTATTT CCCGTCTTTG TATTCATATC GGGCGCCTCC ATGTCCTTCT CCCTGGCGAA ATACACCGGC ACCTCCATCG CCCCCGGACT CTTCCATCTC TGGAAACGGG CTTTCGGCCT GGCTTTTCTG GGCCTTCTGG TCAACGGAAC GCTTACCTGG ACGGAAAGCA TGCGTTACGC CTCCGTTCTG GGACTGATCG GTTTTTCCTG CGCTATTGCA GGAACCTGCA TCCTGCTGTG CCGCCGGACG GGGGCGGTTG CCTCAGCAGC GGGATTCATC CTGGTCCTCA TTACCCTGCT TCAGTTCACC TGCGGCAATT TTACGCCGGA CGGCTCCGTC AACTCATGGG TGGACAGGCA CTGGCTCCCC GGCCGTCTGC ATGGGGGAGT TTTTGACCCG GAAGGCCCGC TCTGCGTCGT TTCCGCCTCC GCCCTGTGCA TGGGAGGATG GATAGCGGGA AAGTTTTTGA AAGAAAGCCG GCTCCCCCCC GTGCGCCTCT GCACGGCAAT GGCAGGAGCG GGCCTTCTCC TTTTCTGCAC CGCCAGGATG CTGGACGGCA CCTACCCCAT CATTAAAAGC ATGTGGACAG GGACCTTCGT CCTGGCCGCC GCCGGCATTT CCCTGACGTT TCTTTCCCTG TTTCATCTGG CCGTTGATGT GTGGAACGAA GGGAAATGGG CCCAATGGGC ATTTCCCCTC CGCGTTATCG GCATAAACGC CCTGGCCGCC TACCTCATCC ACTCCCTGCT CAATGTGCAT GAACTTAACC GTCGCATCTT CAGCGGCATG GCAGACCTCT TCCCCCCGTT CCAGCCCGTC TTCCTTGCCG TGTCCCTTCT GCTGCTGCAA TGGCTGGCCT TGCTCTTCCT TGACAGGCGG CGACTGCCTT TCATCAAAAA AGCGGTCAAA TGA
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Protein sequence | MNAASSVPTR SPRLHSLDAL RGLDMLIILG LDALILLLAS RNPENGFLQE AARQMTHARW EGLHLYDLVF PVFVFISGAS MSFSLAKYTG TSIAPGLFHL WKRAFGLAFL GLLVNGTLTW TESMRYASVL GLIGFSCAIA GTCILLCRRT GAVASAAGFI LVLITLLQFT CGNFTPDGSV NSWVDRHWLP GRLHGGVFDP EGPLCVVSAS ALCMGGWIAG KFLKESRLPP VRLCTAMAGA GLLLFCTARM LDGTYPIIKS MWTGTFVLAA AGISLTFLSL FHLAVDVWNE GKWAQWAFPL RVIGINALAA YLIHSLLNVH ELNRRIFSGM ADLFPPFQPV FLAVSLLLLQ WLALLFLDRR RLPFIKKAVK
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