Gene Amuc_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0516 
Symbol 
ID6273946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp607527 
End bp608639 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content59% 
IMG OID642612566 
Producthypothetical protein 
Protein accessionYP_001877135 
Protein GI187735023 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.108385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCG CTTCTTCCGT TCCCACCCGT TCTCCCCGCC TGCACTCCCT GGACGCCCTG 
CGCGGGCTGG ACATGCTCAT TATCCTAGGG CTGGACGCCC TGATTCTGCT TCTGGCCTCC
AGAAATCCGG AAAACGGCTT CCTGCAAGAA GCCGCGCGCC AGATGACCCA TGCCCGTTGG
GAAGGATTAC ACCTGTACGA TCTGGTATTT CCCGTCTTTG TATTCATATC GGGCGCCTCC
ATGTCCTTCT CCCTGGCGAA ATACACCGGC ACCTCCATCG CCCCCGGACT CTTCCATCTC
TGGAAACGGG CTTTCGGCCT GGCTTTTCTG GGCCTTCTGG TCAACGGAAC GCTTACCTGG
ACGGAAAGCA TGCGTTACGC CTCCGTTCTG GGACTGATCG GTTTTTCCTG CGCTATTGCA
GGAACCTGCA TCCTGCTGTG CCGCCGGACG GGGGCGGTTG CCTCAGCAGC GGGATTCATC
CTGGTCCTCA TTACCCTGCT TCAGTTCACC TGCGGCAATT TTACGCCGGA CGGCTCCGTC
AACTCATGGG TGGACAGGCA CTGGCTCCCC GGCCGTCTGC ATGGGGGAGT TTTTGACCCG
GAAGGCCCGC TCTGCGTCGT TTCCGCCTCC GCCCTGTGCA TGGGAGGATG GATAGCGGGA
AAGTTTTTGA AAGAAAGCCG GCTCCCCCCC GTGCGCCTCT GCACGGCAAT GGCAGGAGCG
GGCCTTCTCC TTTTCTGCAC CGCCAGGATG CTGGACGGCA CCTACCCCAT CATTAAAAGC
ATGTGGACAG GGACCTTCGT CCTGGCCGCC GCCGGCATTT CCCTGACGTT TCTTTCCCTG
TTTCATCTGG CCGTTGATGT GTGGAACGAA GGGAAATGGG CCCAATGGGC ATTTCCCCTC
CGCGTTATCG GCATAAACGC CCTGGCCGCC TACCTCATCC ACTCCCTGCT CAATGTGCAT
GAACTTAACC GTCGCATCTT CAGCGGCATG GCAGACCTCT TCCCCCCGTT CCAGCCCGTC
TTCCTTGCCG TGTCCCTTCT GCTGCTGCAA TGGCTGGCCT TGCTCTTCCT TGACAGGCGG
CGACTGCCTT TCATCAAAAA AGCGGTCAAA TGA
 
Protein sequence
MNAASSVPTR SPRLHSLDAL RGLDMLIILG LDALILLLAS RNPENGFLQE AARQMTHARW 
EGLHLYDLVF PVFVFISGAS MSFSLAKYTG TSIAPGLFHL WKRAFGLAFL GLLVNGTLTW
TESMRYASVL GLIGFSCAIA GTCILLCRRT GAVASAAGFI LVLITLLQFT CGNFTPDGSV
NSWVDRHWLP GRLHGGVFDP EGPLCVVSAS ALCMGGWIAG KFLKESRLPP VRLCTAMAGA
GLLLFCTARM LDGTYPIIKS MWTGTFVLAA AGISLTFLSL FHLAVDVWNE GKWAQWAFPL
RVIGINALAA YLIHSLLNVH ELNRRIFSGM ADLFPPFQPV FLAVSLLLLQ WLALLFLDRR
RLPFIKKAVK