| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0502 |
|---|
| Symbol | |
|---|
| ID | 6275455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 592354 |
|---|
| End bp | 593475 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642612552 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_001877121 |
|---|
| Protein GI | 187735009 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4299] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.326971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAC TTTCCGATAC CAGGCCGCAG AGAATTGCGG CCATTGACGC CCTGCGGGGA
TTTGACATGT TTTTCCTGAC CGGGGGCCTG GCTCTGGTTG TGGCCGGCAT CAATCTTTTT
TACGACCGGA GCCCCGAGTG GCTGGTGAAG CACAGCACGC ACGTGGCTTG GGAGGGATTC
GCCGCCTGGG ATCTGGTGAT GCCCCTCTTT TTGTTCATTG TGGGAACGGC CATGCCGTTT
TCCTTTTCCA AACGCATCGG TTCGGAACCT CTGTGGAAGA TTTACCTGAA GGTTGCCAGG
CGGGTAGTGG TGCTTTTTTT GCTGGGCATG GTGGTGCAGG GCAATCTGCT GAGTTTTGAA
CCGTCCAGGA TGTCCCTGTA CTGCAATACG CTCCAGGCCA TCGCCTCCGG CTACCTGATT
GCGGCCATTT GCCTTCTTCA TCTGTCCATC CGGTGGCAGG TAGCGGCAAC GGGGGGGCTG
CTGGCTGTGT ACTGGCTGGT CATGAAGTTT GTTTCCTTTT CTGACCCCGC GGTGGGTTCC
TGTGCGGCAG GAATGCTTGA ACCGGGGAGG AATCTGGCCC TGCTGCTGGA TAAATACCTG
ATGGGAAACT GGCAGGATGG AACGAATTAT GCGTGGATTC TGGCGCAGTT CGGTTTTGGC
GCCATGACCA TGCTCGGTCT GCTGGGCGGC CAGATTCTGA AGCGGGTGCA GGGGCACGGG
AAAAAGCTGG CGTGGCTGTT ATGTGCGGGC GCGGGCTGCC TGGCGCTGGG ATATGCCTGG
AGCCTGGATT TTCCGATGAT CAAGCGTTTG TTCACCAGTT CCATGGTATT GTGGGCGGCG
GGATGGTGCT ATTTTCTGCT GTTCCTGTTC TATCTGCTGA CGGATGTGCT GAAATTGAAC
TGGTTGACAT TCTTTTTCTC CGTAATAGGG AGCAATGCCA TTTTCGTGTA CATGTGGGTA
TCTCTGTGCC CCCCTACGGG CAATTTCTCC CGGGTATTGT TTGCCGGGTT TAGCGAGTGC
TTCGGGGATG CGGACAGGTT TGTCTTTTAC CTGTGCAATT ACGCCCTGAT TTGGGGCGTG
TTGTATTACA TGTACAAAAA CCGGACCTTC ATCAAGGTCT AG
|
|---|
| Protein sequence | MSSLSDTRPQ RIAAIDALRG FDMFFLTGGL ALVVAGINLF YDRSPEWLVK HSTHVAWEGF
AAWDLVMPLF LFIVGTAMPF SFSKRIGSEP LWKIYLKVAR RVVVLFLLGM VVQGNLLSFE
PSRMSLYCNT LQAIASGYLI AAICLLHLSI RWQVAATGGL LAVYWLVMKF VSFSDPAVGS
CAAGMLEPGR NLALLLDKYL MGNWQDGTNY AWILAQFGFG AMTMLGLLGG QILKRVQGHG
KKLAWLLCAG AGCLALGYAW SLDFPMIKRL FTSSMVLWAA GWCYFLLFLF YLLTDVLKLN
WLTFFFSVIG SNAIFVYMWV SLCPPTGNFS RVLFAGFSEC FGDADRFVFY LCNYALIWGV
LYYMYKNRTF IKV
|
|---|
| |