| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0485 |
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| Symbol | rpmA |
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| ID | 6275421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 573403 |
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| End bp | 573666 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642612535 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001877104 |
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| Protein GI | 187734992 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.229022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0825407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCACA AGAAAGGTCA AGGTTCTGTC AAGAACGGTC GCGACTCCCG CAGCAAGCGC
CTCGGCGTTA AAAAATTCGG CGGACAGGAA GTGATCGCGG GCAACATCAT CATCCGCCAG
CGCGGCACCA AGTGGCACCC CGGCAAGGGC GTAGGCATGG GTCGTGACTA CACCATCTTC
TCCCTGGTGG ACGGCCGCGT GTTCTTTGAC CGCGAAGGCC GCCGCGTCAA TGTGGCTCCG
GAAGGATCTG AAGCCGCCAA CTAA
|
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| Protein sequence | MAHKKGQGSV KNGRDSRSKR LGVKKFGGQE VIAGNIIIRQ RGTKWHPGKG VGMGRDYTIF
SLVDGRVFFD REGRRVNVAP EGSEAAN
|
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