| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0389 |
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| Symbol | |
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| ID | 6274844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 471190 |
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| End bp | 471987 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612440 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001877009 |
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| Protein GI | 187734897 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA TTCGTTTCAC CGCCGCATAT GACGGACGCC CTTATCTGGG CTGGCAAAGC
CAGCCGGGAG GCCGTACCGT CCAGGACGTG CTGGAACGAG CCTTTTCCGG ACTCTTTGGA
ACCACCTGCC GTATCCACGG TTCCGGCAGG ACAGACGCCG GCGTTCATGC TCTGGGCCAG
GTTTTTCATG CAGACGCTCC GGATACCCAC CGCATTCCTG CGGACAAATG GCCTGCCGCG
CTCAACACGC GCCTTCCCCG AACCATCCGG ATTACCCATG CGGAATACGT TCCTCCCGGT
TTCCATGCCC GGTTCAGCGC CACGGGAAAA ACCTACCGTT ACTGCATTTC ACGCGCACCC
ATCCTCAACC CTTTTGACGC CGGGCTGGCC TGGCACCGCC CGCTGGCATG GAGCGTGGAT
ATTCTGGAAC AGGCGGTACA CCTATTCCGG GGAACGCATG ACTTCACTGC TTTTGCCGCC
CTGCGCGGCA ATGAACCGCG CCCTATTCCG GAGGGTTACT TCCGCCGAAC CATCACGCAG
ACACAAGTGG CACAGACAGG GGAACATGTC TTCATCACCT TTACCGGAAC GGGCTTCCTC
TACAAAATGG TGCGCCTCAT GACGGGAGCC GCCCATGAAG CCGCACGTGG AAAAATAACG
CTGGAAGAAC TGGCTCGCCT CATCAACGCT CCGCTCCCGG ATGACAAAAG CCCGTTTTGC
GCCCCGCCGG ACGGACTCAC GCTGATGAGG GTCCATTACC CGGAAGAAAC GTTCGGAGAC
AAAAAGAAAA TAAACTGA
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| Protein sequence | MTRIRFTAAY DGRPYLGWQS QPGGRTVQDV LERAFSGLFG TTCRIHGSGR TDAGVHALGQ
VFHADAPDTH RIPADKWPAA LNTRLPRTIR ITHAEYVPPG FHARFSATGK TYRYCISRAP
ILNPFDAGLA WHRPLAWSVD ILEQAVHLFR GTHDFTAFAA LRGNEPRPIP EGYFRRTITQ
TQVAQTGEHV FITFTGTGFL YKMVRLMTGA AHEAARGKIT LEELARLINA PLPDDKSPFC
APPDGLTLMR VHYPEETFGD KKKIN
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