Gene Amuc_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0379 
Symbol 
ID6274862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp452680 
End bp454983 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content54% 
IMG OID642612430 
Productcytochrome C family protein 
Protein accessionYP_001876999 
Protein GI187734887 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID[TIGR01905] doubled CXXCH domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.295116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATGGC AGAATATTTC CGCCATGTCC GCCCCTGAAT CTGCTGATGC CCCTGTGAAC 
CGCCCTTCCA TGAAGAAATG GGTGGTTCTC CTCGTTGTTC TTGGGGCTTT GATCGGACTG
GGCACAATGG TGAAGGCCTG GATGGACAGA CGTTCTGGAG CGGCAGCGCA GCCGGTTGTT
TTTTCAGGAG GCAGTGAGCA CTGGGACCAG AATGAGGTGC CTATTTCCAT GCAGTGCGGA
GCATGTCATG AAAAGGAATT CCGTCAGTGG GCCGGTTCAG ACCATGCCTG GGCATTCCGC
AAACTGGGAG ATCAATGGGA ATCTGAAGCG TTCCATAACA TGAAGCTGGA CGCTCATGGC
AGCATTCTCC AATTCTCTAC GAATGGTCAC GGGCGCATGG TCCATGACGG TCAGTCTTCA
ACCTCCTGGC GCGCGGAATG GGCCACAGGG AGAATTCCCC TGGTGCAGTA TCTGGTTCCT
GCCAAGGACG GCGGTTTTCA TACCTTGAGC GCTGCATGGG ACGTGAACCG CAAAGAATGG
TTTGATATTT TCGGCAAGGA GTCCCGCCAG CCGGGAGACT GGGGGCACTG GACAGGACGA
GGCATGAATT GGAACACGCA GTGCGCGTGG TGCCACATGT CTTTGTTCCA TAAGAATTAT
GATCCTGTTA AAGATCGGTA TGCTTCTACC TGGACGGAAC CCGGAGTGAC TTGCATTCAA
TGCCACGGCC CCCTGCTGGA CAAGCCGGAG GCGGGGACGG GTTGCATGAT TTCCACCAGG
AACAAGCTGA CGCCACAGCA GATTCATGAT AACTGCGCTT CCTGCCATGC CCGGAGGGAT
GAATTTGATC ATGATTTTGC CGTAGGTGAC CGTTTTGACA ATCATTTCCA ACTGGTGCTT
CCCGTGCAGC CCGGCGTTTT CTGGCCCAAT GGCATGCAAA GGGATGAGGA TTATTGCGAG
ACTGGTCTGA GGTTAAGCCG TATGGGCAAG GCGGGAGTGA CCTGTTTGGA CTGTCATGAT
CCGCATACGG GAACACTGAA GCTTCCTCAA GAAGATAATA CGCTCTGCTT GAGGTGTCAC
GGTACTGGAG AAGCGGTAAA CGGCGTAAAA GCTCCCGTTA TTGACATGGC TACGCATACG
CCATGTCCTC AGTCCAGCAT GGGTGCCCGG TGTGTGGAAT GCCATATGCC GGAAAGCCTG
TATATGGCTC GGGACCCCCG CAGGGATCAT TCTTTCAATT CTCCTGATCC TTTGCTGAGC
GTAGAGTTGG GGATTCCGAA TGCCTGTACC ATGTGCCACG AGGAAAAAAG CAATGAATGG
GCTGCGGAGG CGGTAAAGAA ATATTACGGA GCTAAACCCA AAATGGCGCA GTACAGGGAA
CGGACCAGGG CCGTTCAGCA TGCCTACGAA GGAAAGGAAG ATGTTTTGCC TCTGCTTATG
GAATGTTTTA AGAGGGAGGA AGTGGGTGCA TGGCGCGCTA CGTTATTGGA TTTGATGGAT
GCATGGGCTC ATGAACCCGC CGTCCAGGAA GTGGCCGCGG CGGCGGTTAA GGACCCGGAT
CCTCTGACGC GAGCCGCCGC CGCCAAAGTG ATGGGGCGAG TGGGTAATCC TGCTGCGGGC
AAACTTCTTA ATGATCCGTT CAGGGTCGTG CGCTTGCAGG CGGAATGGGC TCTCCGGGAT
TCCCTGCCTC CGGACAGTCC GGGAATGAAG GAGCTTACTG CTGCCGCTTT GCACCAGGCG
GACCAGCCTT CCGGAGCTAT GAAGCTGGCC CAGATAGCCA TTAGCCGTAA GGATGTGAAA
ACTGCGGAAT TGTGGTTTTC CAAAGCTTTG AAATGGGATG CCACTTCATC CGTGGTGCAC
CGTGATTATG CCGTTTTCCT GGCTTCTCAA GGCCGCAGCC GGGAGGCGGT GGATCAGATG
CAAGAGGCTG TACGCCTGGC TCCCAGGGAT GCCAATCTGT GGTATCTCCT GGGACTGGGC
CAGATTGAAA ATAATGATGA GTCGGGAGCT TTGGAATCCT TTAACGAAGC TTTAAAAATA
GAGCCTTCCT TTATTCGTGC TTTGTTTAAC CGTGCTCTGT TGAATGAAAA AGTGGGCCGG
CTGGAGCAGG CTTTGCAGGA TTTGGAAAAC TGTTCTTCCC TGGAAAAGGG AAATGCGGAT
ATTCCTTTCA CTCTTGCGGT GATGCTTTAC CGCAATGGGC GGTACCGTGA GGCCGCTGCC
GCTGCCGCGG AAGCCCTGCG CCGCGACCCG GGACATGCCC GGGCCAGGCA AATTTTGGAA
TCAGCTTCTC GACATGGAAG ATAA
 
Protein sequence
MIWQNISAMS APESADAPVN RPSMKKWVVL LVVLGALIGL GTMVKAWMDR RSGAAAQPVV 
FSGGSEHWDQ NEVPISMQCG ACHEKEFRQW AGSDHAWAFR KLGDQWESEA FHNMKLDAHG
SILQFSTNGH GRMVHDGQSS TSWRAEWATG RIPLVQYLVP AKDGGFHTLS AAWDVNRKEW
FDIFGKESRQ PGDWGHWTGR GMNWNTQCAW CHMSLFHKNY DPVKDRYAST WTEPGVTCIQ
CHGPLLDKPE AGTGCMISTR NKLTPQQIHD NCASCHARRD EFDHDFAVGD RFDNHFQLVL
PVQPGVFWPN GMQRDEDYCE TGLRLSRMGK AGVTCLDCHD PHTGTLKLPQ EDNTLCLRCH
GTGEAVNGVK APVIDMATHT PCPQSSMGAR CVECHMPESL YMARDPRRDH SFNSPDPLLS
VELGIPNACT MCHEEKSNEW AAEAVKKYYG AKPKMAQYRE RTRAVQHAYE GKEDVLPLLM
ECFKREEVGA WRATLLDLMD AWAHEPAVQE VAAAAVKDPD PLTRAAAAKV MGRVGNPAAG
KLLNDPFRVV RLQAEWALRD SLPPDSPGMK ELTAAALHQA DQPSGAMKLA QIAISRKDVK
TAELWFSKAL KWDATSSVVH RDYAVFLASQ GRSREAVDQM QEAVRLAPRD ANLWYLLGLG
QIENNDESGA LESFNEALKI EPSFIRALFN RALLNEKVGR LEQALQDLEN CSSLEKGNAD
IPFTLAVMLY RNGRYREAAA AAAEALRRDP GHARARQILE SASRHGR