Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0379 |
Symbol | |
ID | 6274862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 452680 |
End bp | 454983 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642612430 |
Product | cytochrome C family protein |
Protein accession | YP_001876999 |
Protein GI | 187734887 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.295116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATGGC AGAATATTTC CGCCATGTCC GCCCCTGAAT CTGCTGATGC CCCTGTGAAC CGCCCTTCCA TGAAGAAATG GGTGGTTCTC CTCGTTGTTC TTGGGGCTTT GATCGGACTG GGCACAATGG TGAAGGCCTG GATGGACAGA CGTTCTGGAG CGGCAGCGCA GCCGGTTGTT TTTTCAGGAG GCAGTGAGCA CTGGGACCAG AATGAGGTGC CTATTTCCAT GCAGTGCGGA GCATGTCATG AAAAGGAATT CCGTCAGTGG GCCGGTTCAG ACCATGCCTG GGCATTCCGC AAACTGGGAG ATCAATGGGA ATCTGAAGCG TTCCATAACA TGAAGCTGGA CGCTCATGGC AGCATTCTCC AATTCTCTAC GAATGGTCAC GGGCGCATGG TCCATGACGG TCAGTCTTCA ACCTCCTGGC GCGCGGAATG GGCCACAGGG AGAATTCCCC TGGTGCAGTA TCTGGTTCCT GCCAAGGACG GCGGTTTTCA TACCTTGAGC GCTGCATGGG ACGTGAACCG CAAAGAATGG TTTGATATTT TCGGCAAGGA GTCCCGCCAG CCGGGAGACT GGGGGCACTG GACAGGACGA GGCATGAATT GGAACACGCA GTGCGCGTGG TGCCACATGT CTTTGTTCCA TAAGAATTAT GATCCTGTTA AAGATCGGTA TGCTTCTACC TGGACGGAAC CCGGAGTGAC TTGCATTCAA TGCCACGGCC CCCTGCTGGA CAAGCCGGAG GCGGGGACGG GTTGCATGAT TTCCACCAGG AACAAGCTGA CGCCACAGCA GATTCATGAT AACTGCGCTT CCTGCCATGC CCGGAGGGAT GAATTTGATC ATGATTTTGC CGTAGGTGAC CGTTTTGACA ATCATTTCCA ACTGGTGCTT CCCGTGCAGC CCGGCGTTTT CTGGCCCAAT GGCATGCAAA GGGATGAGGA TTATTGCGAG ACTGGTCTGA GGTTAAGCCG TATGGGCAAG GCGGGAGTGA CCTGTTTGGA CTGTCATGAT CCGCATACGG GAACACTGAA GCTTCCTCAA GAAGATAATA CGCTCTGCTT GAGGTGTCAC GGTACTGGAG AAGCGGTAAA CGGCGTAAAA GCTCCCGTTA TTGACATGGC TACGCATACG CCATGTCCTC AGTCCAGCAT GGGTGCCCGG TGTGTGGAAT GCCATATGCC GGAAAGCCTG TATATGGCTC GGGACCCCCG CAGGGATCAT TCTTTCAATT CTCCTGATCC TTTGCTGAGC GTAGAGTTGG GGATTCCGAA TGCCTGTACC ATGTGCCACG AGGAAAAAAG CAATGAATGG GCTGCGGAGG CGGTAAAGAA ATATTACGGA GCTAAACCCA AAATGGCGCA GTACAGGGAA CGGACCAGGG CCGTTCAGCA TGCCTACGAA GGAAAGGAAG ATGTTTTGCC TCTGCTTATG GAATGTTTTA AGAGGGAGGA AGTGGGTGCA TGGCGCGCTA CGTTATTGGA TTTGATGGAT GCATGGGCTC ATGAACCCGC CGTCCAGGAA GTGGCCGCGG CGGCGGTTAA GGACCCGGAT CCTCTGACGC GAGCCGCCGC CGCCAAAGTG ATGGGGCGAG TGGGTAATCC TGCTGCGGGC AAACTTCTTA ATGATCCGTT CAGGGTCGTG CGCTTGCAGG CGGAATGGGC TCTCCGGGAT TCCCTGCCTC CGGACAGTCC GGGAATGAAG GAGCTTACTG CTGCCGCTTT GCACCAGGCG GACCAGCCTT CCGGAGCTAT GAAGCTGGCC CAGATAGCCA TTAGCCGTAA GGATGTGAAA ACTGCGGAAT TGTGGTTTTC CAAAGCTTTG AAATGGGATG CCACTTCATC CGTGGTGCAC CGTGATTATG CCGTTTTCCT GGCTTCTCAA GGCCGCAGCC GGGAGGCGGT GGATCAGATG CAAGAGGCTG TACGCCTGGC TCCCAGGGAT GCCAATCTGT GGTATCTCCT GGGACTGGGC CAGATTGAAA ATAATGATGA GTCGGGAGCT TTGGAATCCT TTAACGAAGC TTTAAAAATA GAGCCTTCCT TTATTCGTGC TTTGTTTAAC CGTGCTCTGT TGAATGAAAA AGTGGGCCGG CTGGAGCAGG CTTTGCAGGA TTTGGAAAAC TGTTCTTCCC TGGAAAAGGG AAATGCGGAT ATTCCTTTCA CTCTTGCGGT GATGCTTTAC CGCAATGGGC GGTACCGTGA GGCCGCTGCC GCTGCCGCGG AAGCCCTGCG CCGCGACCCG GGACATGCCC GGGCCAGGCA AATTTTGGAA TCAGCTTCTC GACATGGAAG ATAA
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Protein sequence | MIWQNISAMS APESADAPVN RPSMKKWVVL LVVLGALIGL GTMVKAWMDR RSGAAAQPVV FSGGSEHWDQ NEVPISMQCG ACHEKEFRQW AGSDHAWAFR KLGDQWESEA FHNMKLDAHG SILQFSTNGH GRMVHDGQSS TSWRAEWATG RIPLVQYLVP AKDGGFHTLS AAWDVNRKEW FDIFGKESRQ PGDWGHWTGR GMNWNTQCAW CHMSLFHKNY DPVKDRYAST WTEPGVTCIQ CHGPLLDKPE AGTGCMISTR NKLTPQQIHD NCASCHARRD EFDHDFAVGD RFDNHFQLVL PVQPGVFWPN GMQRDEDYCE TGLRLSRMGK AGVTCLDCHD PHTGTLKLPQ EDNTLCLRCH GTGEAVNGVK APVIDMATHT PCPQSSMGAR CVECHMPESL YMARDPRRDH SFNSPDPLLS VELGIPNACT MCHEEKSNEW AAEAVKKYYG AKPKMAQYRE RTRAVQHAYE GKEDVLPLLM ECFKREEVGA WRATLLDLMD AWAHEPAVQE VAAAAVKDPD PLTRAAAAKV MGRVGNPAAG KLLNDPFRVV RLQAEWALRD SLPPDSPGMK ELTAAALHQA DQPSGAMKLA QIAISRKDVK TAELWFSKAL KWDATSSVVH RDYAVFLASQ GRSREAVDQM QEAVRLAPRD ANLWYLLGLG QIENNDESGA LESFNEALKI EPSFIRALFN RALLNEKVGR LEQALQDLEN CSSLEKGNAD IPFTLAVMLY RNGRYREAAA AAAEALRRDP GHARARQILE SASRHGR
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