| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0335 |
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| Symbol | |
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| ID | 6275002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 394158 |
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| End bp | 394904 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612386 |
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| Product | ABC transporter related |
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| Protein accession | YP_001876955 |
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| Protein GI | 187734843 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00000938347 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTCCC CCGTCATTTC CGTCAGCCAT CTCAAGCGCG GTTTCAAATC CGGTTCCGGG
AGTATAACTG TGCTGAAAGA TATCAGCCTT ACCGTGAACC GGGGAGAGTT CGTCGCCGTG
ATGGGCGCAA GCGGCTCCGG AAAAAGTACT CTGCTGAACG TGCTGGGAGG GCTGCTGGCT
CCGGATTCCG GCACGGTGAC GGTGGATGGG ATGGATCTCG GTTCCATGTC GGATGCCTCC
CTGACGGTGT ACCGGCGGGA CCGTGTAGGG TTCATTTTCC AGATGTTTAA CCTGGTGGGC
ACCTTGAACG TGGAGGAAAA CATTCTGTTG CCGTCCCTGG CGGGAGGCAG GAGGGTGGCT
CCCGCCGCCC TGGACGCCAT GATTGAAAAG GTTGGACTGT CTCACCGTCG GCATGCCATG
CCTGATACGC TCAGCGGCGG GGAGCAGCAG CGCGTGGCGA TTGCCCGTGC ATTGGTCTCC
GGTCCCGCTC TGGTGCTGGC GGATGAGCCT ACGGGCAACC TGGATTCTGA AAATACCCGG
CTTATGGGAG ATTTGTTCCG GGATTTGCAT CGTGCGCAAG GTTGTGCTTT TGTCCTGGTG
ACGCATGCGC CGGACGTAGC CATGTGGGCG GATCGTGTAA TCGTACTCAA GGACGGCAGC
ATTGTGGACG ACAGATCCAC AGCGGAATTT GCCGGTCCTG CGGAATTGTC CTCCTTCTAT
GAACGTACGC TGAATGACGC CTTATGA
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| Protein sequence | MSSPVISVSH LKRGFKSGSG SITVLKDISL TVNRGEFVAV MGASGSGKST LLNVLGGLLA
PDSGTVTVDG MDLGSMSDAS LTVYRRDRVG FIFQMFNLVG TLNVEENILL PSLAGGRRVA
PAALDAMIEK VGLSHRRHAM PDTLSGGEQQ RVAIARALVS GPALVLADEP TGNLDSENTR
LMGDLFRDLH RAQGCAFVLV THAPDVAMWA DRVIVLKDGS IVDDRSTAEF AGPAELSSFY
ERTLNDAL
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