| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0242 |
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| Symbol | |
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| ID | 6275274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 299641 |
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| End bp | 301044 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612290 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001876866 |
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| Protein GI | 187734754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG AACAACATGG CTCCGAAGAA AACGGAGGTA TCCGCATTAA TAAATTCCTG
GCTTCCTGCG GCATTGACTC CCGCCGGGTG GCCGACAGGC TGATTGGGGA AGGACGTGTG
GAAGTGAACG GGAAGGTTAT CGATACGCCT GGGATGAGGG TGACGGAGAA GGATTTCGTG
AAGGTGGACG GCCGCCATAT GACCCCTATG GAAGAGGTTG TGGTGCTGTT GAACAAGCCC
CGCGGGTATG TGTGCAGCCG CGAAGCGCAG GGAGCCATAG GTACTGTTTA CGACCTGCTG
CCGCCGCGCC TGCGCCATCT GAATTATGTG GGACGGCTGG ATGCCGATTC CGAAGGTCTT
CTGATTATGA CGAATAAGGG GGAATTGACC CAGGTTCTTT CCCATCCTAC CGGCGGCATA
GAAAAGGAGT ACTGGGTGAC GGTAGATCAG AATTTTGATA ATTCCGTACT GATGCAGTTT
TTGCGCGGAG TACGCATTCC GGAGGGAAAT GCCAAGGCCA AATATGTTTG CCGCGCTTCC
GCGCGCCGTG CCTGCATTGT TTTGGAACAG GGGTTGAAGC GTCAGGTGCG TCAAATGTTC
CAGTGCCTGG GCCTTCGTGT CCGCAAGTTG GTGCGCGTGC GCATCGGCTC CCTGTGGGGA
GGGGACTTGG AACCCGGGGG CTGGAAATTC CTGGATGATG CGGACGTGGC TCTGTCACTG
AAAAATCCTC CCCGCCAGCG TAAATACCTG GGTGCTTCCC AGCTTGTCGC CGGGGGGGGC
GCCAAGGGTG AGCAGGGCGG AAGAGGCGTT GATTCCGATG AGGATTATGT GTTTAATCCG
GAAGATTTTG AAGCTGGCGA TTCTTATGAA CCTACTCCGG AAATGAAGAC TCGTTTTGTG
GAGACGGAGG ATGAACGTGA AGTCAAGGAA GATGGATATT TCCGGGGAGA TTCCGGCTTC
CGTTCCCGTG ACCGCCGCGG AGATTTTCAT CGTCGTGGAG ATGGCTTCCG CGGCCGCCGC
GGGGATGGGG CCCTGCGCCG CGAGGCCGGT TTCAAAGAAG AGCGACGTAA AGGAGGGTTC
CAACGCCGTG AAGGCGGCTT TGGAAGAGAC CGCCGCGAAG GAGGTTTTCA GCATCAGGAG
GGAGGTTTCA GGGAAAACCG TCGTGAAGGA GGATTCCAAC GCCGTGAAGG CGGTTTTGGG
AGAGACCGCC GCGAAGGAGG TTTCCAGCAT CAGGAGAGAG GTTTCAGGGA AAACCGTCGT
GAAGGAGGGT TCCAACGCCG TGAAGGCGGT TTTGGGAGAG ACCGCCGCGG AGGAGGTTTT
CAGAGGCGTG AAGGCGGGTT TCGTAAGCCG GGCTTTGGAG GCAGGTCCTC CAGCAGTTTT
TCCCGCGGAA ACAGGGGCCA TTAA
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| Protein sequence | MSEEQHGSEE NGGIRINKFL ASCGIDSRRV ADRLIGEGRV EVNGKVIDTP GMRVTEKDFV
KVDGRHMTPM EEVVVLLNKP RGYVCSREAQ GAIGTVYDLL PPRLRHLNYV GRLDADSEGL
LIMTNKGELT QVLSHPTGGI EKEYWVTVDQ NFDNSVLMQF LRGVRIPEGN AKAKYVCRAS
ARRACIVLEQ GLKRQVRQMF QCLGLRVRKL VRVRIGSLWG GDLEPGGWKF LDDADVALSL
KNPPRQRKYL GASQLVAGGG AKGEQGGRGV DSDEDYVFNP EDFEAGDSYE PTPEMKTRFV
ETEDEREVKE DGYFRGDSGF RSRDRRGDFH RRGDGFRGRR GDGALRREAG FKEERRKGGF
QRREGGFGRD RREGGFQHQE GGFRENRREG GFQRREGGFG RDRREGGFQH QERGFRENRR
EGGFQRREGG FGRDRRGGGF QRREGGFRKP GFGGRSSSSF SRGNRGH
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