| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0232 |
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| Symbol | |
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| ID | 6275293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 290764 |
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| End bp | 291444 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642612280 |
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| Product | peptide deformylase |
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| Protein accession | YP_001876856 |
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| Protein GI | 187734744 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.961673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACACT CTTTTATCCA TATCATCCTG TCTGCCGTGA TTCTTGATAT TCTTCAATAC
GGACATCCTC TTTTGAGAGA GGAATGCGGG CCCGTGGTTC ATATCAACAG GGATATCCTT
TCCTTCCTGG ACGATATGCA GGAAACCCTG GCCCAGGGAG GCATAGGCCT GGCCGCGCCG
CAGGTGGGCA GGCCCATCCA GCTGGTCACC ATCAACATCC CTTCCACAGA CGCAACCACT
ACCTGGCTGG AAGTGGACGG ATGCCCAACT ACGTTGTCCC GAATCATGCC CTTGAATTTT
ATCAATCCCA TCCTGCATCC CTTCGGCAAA AAAGTGCCGT ACCGGGAAGG GTGCCTGAGC
ATCACCAAAG TATATGCGAA CGTGATGCGC CGCTCCTGCG TAAGGGCTGT TTTAACCATG
ATGGACGGAC GGACTGTGAC CGTGAAATGC AACGGACTGC TGGCGCGCTG CCTGCAGCAC
GAGGTAGACC ACCTTCACGG CGGCCTGTTT ACGGATCTGG TTTCCTCCGG TGACCATGAC
AAGGTGATAC GGAGGCTCAG ATTGACCCAT CCGGACGCTT TTGAAGAAGA TGACGACAGC
TACGCTCGCC GCATGAAGGA AAAACGCCGC GCCCAGGCAC GGAAAGCCCG GATGCCGCAG
CCTCCCGGAA AAACAGCCTG A
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| Protein sequence | MSHSFIHIIL SAVILDILQY GHPLLREECG PVVHINRDIL SFLDDMQETL AQGGIGLAAP
QVGRPIQLVT INIPSTDATT TWLEVDGCPT TLSRIMPLNF INPILHPFGK KVPYREGCLS
ITKVYANVMR RSCVRAVLTM MDGRTVTVKC NGLLARCLQH EVDHLHGGLF TDLVSSGDHD
KVIRRLRLTH PDAFEEDDDS YARRMKEKRR AQARKARMPQ PPGKTA
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