| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0225 |
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| Symbol | |
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| ID | 6275305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 281234 |
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| End bp | 282277 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642612270 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_001876849 |
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| Protein GI | 187734737 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAATGG CCATGATGAA AAAAGTTGTC TCTTTATGTG CGGCTTCCTC CGCCTTCTTT
TTTTTGTGCG GATGTGACCG CGCCCCTTCT TCCGGGGAAA AGCGGGCTGC TTCTTCTGCG
GAACGGGAAA AGCCGTCTGC GGTGCGGAAA GAGGCGGAGA CATGGAGGGA GCGTCTGGAC
GCTGCTGTTG CCGGCTCCGT CCGCGAGAAG GAAAATGGTA GCGAGCATGT GAAAGCCCTC
AATGATGTGG CTGCCCTGTA TGCGGAGGGA TTGCAGAATG GCTGGGTTCA TCCGCTGGAT
GTGCGGGCCT GGTGTGATTC CGTGGCGGAG GCCGGTTCCG GGTATTCCGG GGAAACGGTC
ATCGGCGCCA TGTTCCTGTA TGGGACGGGA ATCAAGCGTG ATGCCGTAGC GGCCAGGGAG
TGGTTTGAGT ACGGGCTTGC CCGCCCGGGG ACCCAGCGGG GAAACGCTCT GTACATGTTG
GGAATGATGT ATTTCAAGGG GGATGGCGCG GATCAGGACC TGAATAAGGC GCTGGGGCTG
TGGCACAAGG CAGCGGATGA GGAACATCCG GCAGCCATGG GGCTGCTGGG CCGGGCTTAC
ATGGAGGGGA AGATGGGGGT TGAGAAGGAT GCCGCTTCCG GCCTGGCGCT GCTGGAGAAG
GCCGCCAACG GGGGGAATAC GCCTTCGTCC GTCTATCTGG GGAACATTTA TGCAAAGGGG
CAGGGGGTGG AGCGGGATAT GGAGCGTGCC ATGAAGTGGT ATGAACAGGC GGCTTCAGCC
GGAGACGCCC ATTCCCAGTA TATTGTGGGA CTGGCCTGTC TGGAAGGTTC CGGCGTGCCT
GTGGATGAGG GCAAGGCGTT CAGCTGGCTC CGGCTGGCCG CCGGGCAGGA CCACGTCAAC
GCCATGCTGA TGCTTTCCGT CTGCTACAGC ACAGGAAAAG GGACCCCTCA GAATGCGGAT
ATGGCGGAAG TCTGGAAAAA GAAGGCGCTT CAACTGAATG CGGAACGCGA GGGAAGTTCT
GCGCCGCAAA CGCAAAAACG TTAA
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| Protein sequence | MVMAMMKKVV SLCAASSAFF FLCGCDRAPS SGEKRAASSA EREKPSAVRK EAETWRERLD
AAVAGSVREK ENGSEHVKAL NDVAALYAEG LQNGWVHPLD VRAWCDSVAE AGSGYSGETV
IGAMFLYGTG IKRDAVAARE WFEYGLARPG TQRGNALYML GMMYFKGDGA DQDLNKALGL
WHKAADEEHP AAMGLLGRAY MEGKMGVEKD AASGLALLEK AANGGNTPSS VYLGNIYAKG
QGVERDMERA MKWYEQAASA GDAHSQYIVG LACLEGSGVP VDEGKAFSWL RLAAGQDHVN
AMLMLSVCYS TGKGTPQNAD MAEVWKKKAL QLNAEREGSS APQTQKR
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