Gene Amuc_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0184 
Symbol 
ID6275364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp232044 
End bp232547 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID642612230 
Productprotein of unknown function DUF456 
Protein accessionYP_001876809 
Protein GI187734697 
COG category[S] Function unknown 
COG ID[COG2839] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.348806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCATC TCCTTTCGGA AACCCTCGTC TGGTGCGTCA CCCTGCTGTT ATTCGGCATG 
GGGCTGATCG GCACGCTCAT CCCCATGCTT CCCGGCATTA TGATCATTGC GGCCGGGTGC
GTCTGGCAGG GAGTCATGGG CAGAGAAAAC CTGGCGTGGT GGGAATGGAC CGTCCTGGCG
CTGCTGGTGG CGGGAGGCAT GGTCATTGAC AAGCTTTCCG GAGGCATGGG CGCCAAAAAA
TTCGGCAGCA CTGCCGCCGG CATCTGGGGA GCCATCATCG GCGCCGTCGC GGGGAGCCTC
CTTTTCTCCC CCATTACGGG CCTTTTGTTC ATGCCGTTCC TGGGGGCGCT GCTGGCGGAA
CTTATCTTTG CCAGAAAGGA TATCATGAAC GCTTTCAGGG CCGGGTCCGG AGCGGCGCTT
GGGATGCTTG CCGGTCTGCT GCTGGAATTT ACCTGCGGCC TGCTCATCAT CGCCTGGTTC
TGTTCCTGCT GCTTCCTGTT TTGA
 
Protein sequence
MPHLLSETLV WCVTLLLFGM GLIGTLIPML PGIMIIAAGC VWQGVMGREN LAWWEWTVLA 
LLVAGGMVID KLSGGMGAKK FGSTAAGIWG AIIGAVAGSL LFSPITGLLF MPFLGALLAE
LIFARKDIMN AFRAGSGAAL GMLAGLLLEF TCGLLIIAWF CSCCFLF