| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0179 |
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| Symbol | |
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| ID | 6275376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 226864 |
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| End bp | 227565 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612225 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001876804 |
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| Protein GI | 187734692 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.31745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGG GTTTTGTCTT TGACCTGGAC GGGACGCTGG TGGACTCTAT TCCCGGTATC
GCCCGCGGCC TGAATCTGGC CTTGAAAGCG CTGGGGTATC CGGAGCATTC CGTGGACGCC
ATCCGGGAAA TGGTGGGCAA GGGGGCCCGG GAGCTTTGCC TGGCTTCCCT GAAAGGCTAT
TTCAACGGAA ACGTGCCGGA GGAAGCTTTT GAAGCGGTGC ACCGGGGATT CATGCGTGAA
TACCCGCACA CCTGGCAGGA GGGCACGGTT CCGTACCCCG GCATCCGGGA AATGCTGTTG
TCCCTGGCCG GAGAAGGCCA TCCTCTGGGC GTTTTATCCA ACAAGCCCCA TGCGGTTACG
GTGCCGCTGG TGCGCCATAT CCTGCCTGAA ATTCCCTTCC GGGAGGTGAT GGGTTTTTCC
GAACGCTTTC CGCGCAAGCC GGAACCTGAC TCCCTGCTGT CCATCGTCCG TTCCTGGGGC
AGGGAGCCGG CGCAGGTGTG CATGGTGGGG GACTCCGCCC ATGACGGCAA CACGGCCGTG
AACGCCGGAA CACGGCTTAT TCTGGTGGGG TGGGGCTACA GTTCCCGTTC CGCTCTGGAT
GCCTTCCGGG TGCCGGTGTG CGCCGCCGCG GGGGAATTAT CTGCCCGGCT GCATGATGAA
AGCAGCCTGC CGTTTCCCGT TGCCGCGCAT AGGAATTGTT GA
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| Protein sequence | MKTGFVFDLD GTLVDSIPGI ARGLNLALKA LGYPEHSVDA IREMVGKGAR ELCLASLKGY
FNGNVPEEAF EAVHRGFMRE YPHTWQEGTV PYPGIREMLL SLAGEGHPLG VLSNKPHAVT
VPLVRHILPE IPFREVMGFS ERFPRKPEPD SLLSIVRSWG REPAQVCMVG DSAHDGNTAV
NAGTRLILVG WGYSSRSALD AFRVPVCAAA GELSARLHDE SSLPFPVAAH RNC
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