| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0178 |
|---|
| Symbol | |
|---|
| ID | 6275377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 225453 |
|---|
| End bp | 226706 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642612224 |
|---|
| Product | protein of unknown function DUF195 |
|---|
| Protein accession | YP_001876803 |
|---|
| Protein GI | 187734691 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.309141 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCC CATTTTTTCC CTGGTTCCTG GCCTTTTTGC TGCTGATCGC CTGCGTGGCG
CTGCTGGTTC TGCTGCTGCG GTACCGGGAC CGCTCCGTCC GCCTCGAAGC GGAATCCCGC
TCCTGGCAGG AACGGGCGGA GGACAGAACC CAGATGCTCC GCCGGGCGGA AGAGGTGCTG
AAAGATTCCT TCGCCGGCAT CAGCGCGGAA GTTCTCCGGA ACTCGGAGAA ACAGTTTCTG
AACCTGGCGG AAACGCGGCT GCAAAGCCAG CGCCAGCAGG CCAACCATGA CCTGGATTCC
CGCAAACAGG CCATCGAGTC CATGCTGAAG CCGGTGAGCG AATCCCTGAA ACTGGTCCAG
TCCCGGCTGG GAGAGATGGA AAAGGAACGC GTGGGCGCCT ATACGGACCT GAAAACGCAA
ATCCGCTATA TCCTTTCCGG CAATGAAGCC CTGAAAAATG AAACCGCCAG GCTTTCCCAG
GCTCTGCACC ACAACAGCGT TCGCGGCCAA TGGGGAGAGC TCCAACTGCG CCGCGTGGTG
GAACTGGCGG GAATGGTGGA GTACTGCGAT TTCACGACTC AGGAAACCCG TTCCAGGGAG
GAGGAACGGG TGCGGCCGGA CATGGTCATT CACCTTCCTG GAGGCCGTTC CATCATCATT
GACGCGAAAG CGCCCATGGC ATCCTACCTG AATGCCGGGC AGACGGAGAA TCCGGAAGAG
CGCAGCCAGT GGATGGCCCG CCATGCCGCG GACGTCAAGA GGCATTTGCA GCAATTAAGC
GCCAAGAATT ACTTTGCCCA GTTTTCCCAA TGCCCCGAAT TCGTCATTAT GTTCCTGCCC
GGGGAATCCT TTTTCCAGGC GGCTCTGGAA GCAGACCCCT CCCTGATTGA ATTCGGCGCG
GAGAATAAAG TCATTCTTTC CACCCCATCC ACCCTGATTG CCCTGCTGAA AGCCGTCGCT
TACGGATGGA AGCAGGAGCA GCTGGCGGAT AATGCCAAGA AAATTTCGGA AGCGGGAGCG
GACCTGTACA ATACCTGCTC TATCCTTTCC GGTCATTTTT CCTCTCTGGG CAAGAGCCTG
AACCAGGCGG TAGCCCAGTA CAACAAAACC GTTTCCTCTT TTGAACACCG GTTCATCCCC
CGGGCCCAGA AGTTGAAAAA TCTGGGCGTC ACCTCCACGA AGGAACTTCC CCGCTCCCTG
GAAGACATTA CCGAACAGGC CAAATCTGCG GATGTTCCGG ATACTACGTC CTGA
|
|---|
| Protein sequence | MISPFFPWFL AFLLLIACVA LLVLLLRYRD RSVRLEAESR SWQERAEDRT QMLRRAEEVL
KDSFAGISAE VLRNSEKQFL NLAETRLQSQ RQQANHDLDS RKQAIESMLK PVSESLKLVQ
SRLGEMEKER VGAYTDLKTQ IRYILSGNEA LKNETARLSQ ALHHNSVRGQ WGELQLRRVV
ELAGMVEYCD FTTQETRSRE EERVRPDMVI HLPGGRSIII DAKAPMASYL NAGQTENPEE
RSQWMARHAA DVKRHLQQLS AKNYFAQFSQ CPEFVIMFLP GESFFQAALE ADPSLIEFGA
ENKVILSTPS TLIALLKAVA YGWKQEQLAD NAKKISEAGA DLYNTCSILS GHFSSLGKSL
NQAVAQYNKT VSSFEHRFIP RAQKLKNLGV TSTKELPRSL EDITEQAKSA DVPDTTS
|
|---|
| |