| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0166 |
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| Symbol | |
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| ID | 6275392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 203383 |
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| End bp | 204477 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612211 |
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| Product | twitching motility protein |
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| Protein accession | YP_001876791 |
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| Protein GI | 187734679 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.197236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCA TCGACCAATA CTTCAAATAC CTCGTAGAAG CGGGCGGTTC CGACCTTCAC
CTCAGCGAAG GCCAGCCTCC TAAAGTCCGC GTTAACGGGA CCATCTCCGC CATCTCCGAC
GAAAATCTGG AAGGCCAGGC GTTCAAAAAC CTTCTCGCGG AAATATGCGA TCCCCAGGCC
TTCCAGAAAT ATCTGGAAGA AGGGGACCTG GACTTTGCCT ATGAAATGGA TGAAACATCC
CGTTTCCGCT GCAACTACTT CAAGCAGCAG CACGGCCTGG GGGCTGTCTT CCGCCTCATT
CCCACCAAAA TAGCCACGCT GGAAGAACTG GGCGTGCCTA CGGTCGTCAA GGAATTCGCC
CATATGAGAT CCGGCCTTGT ACTGGTCACA GGGCCCACCG GCTCCGGTAA ATCCACCACG
CTGGCCGCTA TCATCGACTA CATCAACAGC AACCAGGCGC GGCACATCAT CACCGTGGAG
GAACCTATCG AATTCGTCCA TCCCAATAAA AAATCCATCG TCACCCAGAG GGAAGTGCCT
CTCCAGACGC CTTCCTTCGC AGACGGCCTC CGGGCTTCCC TTCGTGAAGA CTCCGACATC
GTGCTGGTGG GTGAAATGCG CGACCTGGAA ACCATCTCCC TGGCGCTCAC GGCGGCGGAA
ACCGGCCTTC TGGTATTCGG CACCCTGCAC ACGAACAACG CCAGCAAAAC CATTGACCGT
ATCATTGACG TATTCCCGTC TGACCAGCAA TCCCAGGTGC GCACCATGCT TGCGGGTTCC
CTCCGCGGCG TCGTGGCGCA GCTCTTGATG AAGCGCAGCG ACAAACCGGG GCGCGTAGCC
GTCAATGAAA TTCTCTTTGC CACGCCGGCC GTGGCGGCCA TCATCCGTGA AGGCGCCACG
CAGAAAATCC CTGACGTCAT CGTCGGCGGC AAGGCCATGG GCATGCAATT CATGGATGAC
GCCATCTGGC AAAAACTCCA ACAGGGCATC GTCTCCCCGG AAGAAGCCTA CATGAAGTGC
ATTGAAAAGA AGAGATTCCG CAACTTCCTT CCTCCGGAAT CCGCCCGCCT GGCAGACTCC
GGCGGCGGAA ACTAA
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| Protein sequence | MAVIDQYFKY LVEAGGSDLH LSEGQPPKVR VNGTISAISD ENLEGQAFKN LLAEICDPQA
FQKYLEEGDL DFAYEMDETS RFRCNYFKQQ HGLGAVFRLI PTKIATLEEL GVPTVVKEFA
HMRSGLVLVT GPTGSGKSTT LAAIIDYINS NQARHIITVE EPIEFVHPNK KSIVTQREVP
LQTPSFADGL RASLREDSDI VLVGEMRDLE TISLALTAAE TGLLVFGTLH TNNASKTIDR
IIDVFPSDQQ SQVRTMLAGS LRGVVAQLLM KRSDKPGRVA VNEILFATPA VAAIIREGAT
QKIPDVIVGG KAMGMQFMDD AIWQKLQQGI VSPEEAYMKC IEKKRFRNFL PPESARLADS
GGGN
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