Gene Amuc_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0162 
Symbol 
ID6275558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp200707 
End bp201033 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content57% 
IMG OID642612207 
Productprotein of unknown function DUF883 ElaB 
Protein accessionYP_001876787 
Protein GI187734675 
COG category[S] Function unknown 
COG ID[COG4575] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.28952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA ACCAAACCGA ACTTGAAACG ACCGCAGCAG CAAACGACAC TTCCTGCTCC 
TGCCCTTCCG CCCGCGAGCT TGCCGTCACC AGATTTCAAC AGGCCAGGGC TTTCGCCGCA
GCTAAAGTAA ACCAAATCCG CAAGGCGGCT ACGGAACAGG CCAGCACCAT CTGCGACTAC
GCCCAGGAAA AGGGAGAAGT CATCCGTGAC AAGGCCAAGA AGTTCCACGA AGCAGGCGAA
GAATACGTGA AGGAAAAGCC CACCCAGTCC GTGCTGATTG CCATGGGCGT GGGCCTTCTC
ATCGGTCTGC TTATCCGCCG TCGTTAA
 
Protein sequence
MQDNQTELET TAAANDTSCS CPSARELAVT RFQQARAFAA AKVNQIRKAA TEQASTICDY 
AQEKGEVIRD KAKKFHEAGE EYVKEKPTQS VLIAMGVGLL IGLLIRRR