| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0128 |
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| Symbol | |
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| ID | 6274893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 158875 |
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| End bp | 160968 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642612172 |
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| Product | DNA topoisomerase (ATP-hydrolyzing) |
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| Protein accession | YP_001876753 |
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| Protein GI | 187734641 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0252875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGCCG ACTACTTTCT GGATTACGCC TCGTATGTCA TTCTGGAACG GGCCGTACCC
AAGATCAATG ACGGGTTTAA ACCTGTGCAG CGCCGTATTC TGCACGCCAT GGACCGCCTG
GACGACGGGC GTTATAATAA AGTGGCTAAT ATCGTGGGAG ACACGATGAA ATTCCATCCG
CACGGCGACC GTTCCATTGC AGACGCGCTG GTGGGGCTGG GACAAAAAGG GCTGCTTATC
GACACGCAGG GGAACTGGGG CAATATTCTG ACAGGCGACC CCGCAGCGGC TTCCCGCTAT
ATTGAAGCCC GCTTTACCTC CTTTGCGCGT GATGTAGTAT TCAGCCCCAA GGTCACGGAA
TGGCAGCTCT CCTATGACGG CAGGAACAAG GAACCGGTCA GCCTTCCCGT CAAATTTCCC
CTGCTTCTCG CTCAGGGAGC GGAAGGCATC GCCGTGGGGC TTTCCAGTAA AATTCTTCCC
CACAACTTCA ATGAGTTGAT TGAAGCCTCC ATCGCCTACT TGCGCGGCCA GCCCTTCCAG
CTTCTGCCGG ACTTTCCGAC CGGAGGCGTG ATGGATGCCA CCAACTACCG TGACGGAGAA
CGAGGAACGG GCCGCGTCCG CATCAGGGCG CGCATCCTCA CGGAATCGAA GAAACTTCTC
CGCATCACGG AAATCCCGTT CGGCGTCACC ACGGAAATCT TAATTGATTC CATTGTCTCC
GCTGCGGAAA AGGGAAAAAT TAAAATCGCC CGCATTGAGG ACAATACGGC CCAGCATGTG
GACATCCTGG TCCATCTCCC GGCCGGAGCG GATCCGGAGC AGACGAGGAA AGCCCTGTTT
GCCTTCTCCG CCTGTGAAGT CAGCATCTCC CCGAATGCCT GCGTCATTGT GGAGGAAAAA
CCCAGGTTCA TGTGTGTTAG CGACATCCTG CGCTACAATA CGGACTCCAC CAAGGAAATC
CTGCGCCAGG AGCAGGAAAT CCGACTCAAG GAACTGAACG AGGCGTGGCA CCAGGCCAGC
CTGGAAAAAA TATTCATTGA AAACCGCATC TACCTCTCCA TAGAAGATTC CGAAACGTGG
GAAGAAGTGC TCGGCACCAT TGACCGGGAA TTGCAGCCGT TTGCATCCCG GCTGCGCGCC
CCCATTACCA GGGACGACCT GGTAAGGCTG ACGGAAATCA AAATCAAGCG GATTTCCAAA
TTTGACGCTT TCAAGGCGGA CCAGCACATC CGCCAGCTTG AAGAGGACAT CGAACAAACG
CAGAAGAACC TCAACCAGCT TACCAAATTC ACTATCCGCT GGTTTGAAGC CCTGCGTAAA
AAATACGGCG CCGCCTATCC GCGGAAAACG GAAATTTCCT CCTTCGGCTC CGTAAACCGC
GCGCAGGTGG CTGTTGCCAA TGAAACATTG TATATTGATG ACGAAGGCTT TGCCGGTTAC
GGTGTCAAGA AGGGAAACCC TGTCTGCAAA TGCTCCACGC TGGATGACGT GTTGATCATT
GACAATGCAG GCGTGCTCAA AATCGTGCGG ATTCAGGACA AATTTTTCGC TGGTAAAAAT
CCCCTTTATA TTTCCGTCAT CAAAAAAGGG GACGACCCCG TGTTCAACCT GATTTACCGG
GACGGAAAAG ACGGCCCCGT GTACGCCAAG CGTTTCCGCA TAGGAGGGTT CACCAGGGAC
AAGGAATATC CGCTTACCCG AGGCGCAAAG GGAACGCGCA TCTTCCACTT CTCCGTGCAT
GAAACGGAGG AAAACAGTTC CCAGATAAGC GTAAACGTTT ATCTGAAAGC CGTTCTGAAA
CTCCGTAACC TGATCAGGCC CTTCCATTTC GCGGACCTGA GAATCAAAAA CCGCGGTGCC
CAGGGAAATA TCATTACCAG GCATCCTGTG GAACGCGTCT CCCGCATCAT GCCTCCGGCC
AAGTCCGGAA ATGAGGAAAC GGAAGGGCCA ACAACCGCTC CTTCCGCAAC AGCGGAACGG
ACGGAAGGCT CACCCGCCCC CTCCGCGGAA ACGCTGCATC CTGAAACAGC CCCACATTTG
GAGGAACCGC CTGCCGATCC GCCGCTGGAA CAGGGCTCCC TGTTTGACTC CTGA
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| Protein sequence | MYADYFLDYA SYVILERAVP KINDGFKPVQ RRILHAMDRL DDGRYNKVAN IVGDTMKFHP
HGDRSIADAL VGLGQKGLLI DTQGNWGNIL TGDPAAASRY IEARFTSFAR DVVFSPKVTE
WQLSYDGRNK EPVSLPVKFP LLLAQGAEGI AVGLSSKILP HNFNELIEAS IAYLRGQPFQ
LLPDFPTGGV MDATNYRDGE RGTGRVRIRA RILTESKKLL RITEIPFGVT TEILIDSIVS
AAEKGKIKIA RIEDNTAQHV DILVHLPAGA DPEQTRKALF AFSACEVSIS PNACVIVEEK
PRFMCVSDIL RYNTDSTKEI LRQEQEIRLK ELNEAWHQAS LEKIFIENRI YLSIEDSETW
EEVLGTIDRE LQPFASRLRA PITRDDLVRL TEIKIKRISK FDAFKADQHI RQLEEDIEQT
QKNLNQLTKF TIRWFEALRK KYGAAYPRKT EISSFGSVNR AQVAVANETL YIDDEGFAGY
GVKKGNPVCK CSTLDDVLII DNAGVLKIVR IQDKFFAGKN PLYISVIKKG DDPVFNLIYR
DGKDGPVYAK RFRIGGFTRD KEYPLTRGAK GTRIFHFSVH ETEENSSQIS VNVYLKAVLK
LRNLIRPFHF ADLRIKNRGA QGNIITRHPV ERVSRIMPPA KSGNEETEGP TTAPSATAER
TEGSPAPSAE TLHPETAPHL EEPPADPPLE QGSLFDS
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