Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0041 |
Symbol | |
ID | 6275158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 57297 |
End bp | 58373 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642612083 |
Product | peptide chain release factor 1 |
Protein accession | YP_001876669 |
Protein GI | 187734557 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.334875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTACA CACCTCTCAT TGAAAAACGC CGCCAGCGCC TTGAAGAATT GGAAACAGTC ATTGCCGAAC CGGACTTCTT CAATGACCAG AAAAAGGCCT CGGAAATCAT GAGAGAGCAC CGCCGCCTGA AGGAACTCAT GGAAACATGG GATTCCCTGA ACGCCACGGA ACAACAGCTG GCGGACAACC AGGAACTGGC CAAGACGGAC GATCCGGAAT TAGCGGAACT GGCCGCCCTG GAGATTCCAG AACTGGAAGC CGCCCTGGAA AAACTGCGGA GCGACGTGCA GTACAGCCTG CTACCCCGCG ACACGACGGA AGACCGGGAC GCCATCATTG AAATCCGCGC CGGAACGGGC GGGGATGAAG CCTCCCTGTT TGCCGGAGAC CTGCTGCGGA TGTACCAGCG TTTTGCGGAA GAACGCGGCT GGCGCTTCGA GCATCTGGAA AGCAGCCCGT CGGACGTGGG CGGATTCAAG GAAGTCGTCT GCCGCATTGC CGGGGAAGAA GTGTTCCGCT TCCTGAAATA TGAAGGCGGC GTGCACCGTG TGCAGCGCGT TCCCGCTACG GAAACGCAGG GGCGCATCCA TACTTCCACC GCCACCGTGG CCGTCATGCC GGAAGCGGAG GAAGTGGACA TAGAAATCCG CCCGGAAGAT CTCCGCATCG AAGTATGCCG TTCCGGCGGA GCCGGAGGCC AGCATGTGAA CAAAACGGAA TCCGCCGTTC AGATATGGCA CATACCCACG GGCGTTTATG TCCGGTGCGA GGAAGAGCGC AGCCAGATGA AAAACCGAGA AAAAGGCATG AAAATCCTGC GCGCCAAGCT CTTTGAAGCC AAAAAACGGG AAGAGGCGGA AAAATACTCC GCCGCGCGCC GCAATCTCAT CGGCTCCGGC GGCCGTGAAG AAAAGATACG CACATACAAC TTCCCGCAGA ACCGTCTGAC AGACCACCGC ATCGGCTACA CGTCCCACAA TCTGGACGGT ATCCTGATGG GGCAGCTGGA AGACCTGATT ATGGCCCTCC AGCATGCGGA AATGCAGGAA CGCCTGGCGG AGGCCGGAAT GTCCTAA
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Protein sequence | MDYTPLIEKR RQRLEELETV IAEPDFFNDQ KKASEIMREH RRLKELMETW DSLNATEQQL ADNQELAKTD DPELAELAAL EIPELEAALE KLRSDVQYSL LPRDTTEDRD AIIEIRAGTG GDEASLFAGD LLRMYQRFAE ERGWRFEHLE SSPSDVGGFK EVVCRIAGEE VFRFLKYEGG VHRVQRVPAT ETQGRIHTST ATVAVMPEAE EVDIEIRPED LRIEVCRSGG AGGQHVNKTE SAVQIWHIPT GVYVRCEEER SQMKNREKGM KILRAKLFEA KKREEAEKYS AARRNLIGSG GREEKIRTYN FPQNRLTDHR IGYTSHNLDG ILMGQLEDLI MALQHAEMQE RLAEAGMS
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