| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0017 |
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| Symbol | |
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| ID | 6275223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 21561 |
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| End bp | 23006 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612057 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_001876645 |
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| Protein GI | 187734533 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATT CATCATCACG CCGTCGTTTC CTTCAGACCC TGGGCCTGGC CACTGGCGCC
CTGGCTGCCG GTTCCTTTGC CAACGCCCAG GAAGTAGCCC CCCTGGCTCC CAAGAAAATC
ACCATTCCGG ACCCGAATAA CATCGGCCCC ATGACCACGT GGCCCCCGCG CAAGCCCGGC
GCCATCTACA TGGGCGGCTT CAGGGCTCCC AAGCTGGACA AGGTGCGTGT GGCCTTTGTC
GGCGTGGGTG AACGCGGTTC CATGCACGTG GGCCAGATGG CCGTTATAGA AGGTGCGGAA
ATTGTCGGCA TTTGCGACCT GTATGAAGAC TGGGCCAAGC GCAGTGCGGA CGTCGTGGAA
AAGAAGACGG GCAAGCGCCC CCCCATTTTC ACGAAAGGAC CGGAAGACTA CAAGCGCATG
ATGAAGGAAG TCAAGCCGGA CGCCGTCATC GTCTGCCCCA GCTGGGAATG GCACTGCCGT
GTTACCTGCG ACGTGATGAA GATGGGCGCC CACGCCTTTG TGGAAGTGCC TATGGCCGTC
TCCATCAAGG AACTCTGGGA AATCGTGGAT ACCTCCGAAG AAACCAGGAA GCACTGCATG
ATGATGGAAA ACGTCAACTA CGGACGTGAG GAACTCATGT ACCTGAACAT GGTGCGCCAG
GGCGTCATTG GCGACCTGCT GTACGGAGAA GCCGCCTACA TCCATGAACT GCGCGGACAG
ATGAAGCAGG TGGAACGCGG CACCGGTTCC TGGAGAACCT ATCACTACGC CAAGCGCAAC
GGCAACGTGT ATCCCACGCA CGGCCTCGGC CCCATTGCCC AGTACATGAA TCTGGCCCGC
AAGGACGACT GCTTCGGCAG GCTCGTCTCC TTCTCCAGCC CGGCCCTGGG CCGCGCCGCG
TATGCCAAGA AAAATTTCCC GGCGGACCAC AAGTGGAACA AGCTGGACTT TGCCTGCGGC
GATATGAATA CCTCCATCAT CAAGACCACC ATGGGCCGCA CCGTCCTGGT GGAATGGGAT
GAAACCAGTC CGCGCCCCTA CTCCCGCCTG AATCTCATCC AGGGCACCCT GGGCACCTTG
GCCGGCTTCC CGACCCGCGT AGCCGGGGAA AAGCTGGGCA ACGGAAATTA TCATGAATGG
ATTGAAGGCA AAGAAAAACT GGCCCCTATT TTTGAAAAGT ACGATCACCC GCTCTGGAAG
AGAATCGGGC CGCTGGCCCT GAAGATGGGC GGTCACGGCG GCATGGACTT CGTGATGCTC
TTCCGCATCA TCGAATGCCT CCGCAATGGC GAACCGATGG ACCAGAACGT TTATGAAGGA
GCTTTCTGGT CCTCCGTCTC CGAGCTTTCC GAATACTCCG TGGCCCAGGG CGGCATGCCC
CAGGTATTCC CGGACTTCAC CCGCGGAGAC TGGAAAACGA CTGCTCCGCT GGGCATCGTC
CAGTAA
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| Protein sequence | MDNSSSRRRF LQTLGLATGA LAAGSFANAQ EVAPLAPKKI TIPDPNNIGP MTTWPPRKPG
AIYMGGFRAP KLDKVRVAFV GVGERGSMHV GQMAVIEGAE IVGICDLYED WAKRSADVVE
KKTGKRPPIF TKGPEDYKRM MKEVKPDAVI VCPSWEWHCR VTCDVMKMGA HAFVEVPMAV
SIKELWEIVD TSEETRKHCM MMENVNYGRE ELMYLNMVRQ GVIGDLLYGE AAYIHELRGQ
MKQVERGTGS WRTYHYAKRN GNVYPTHGLG PIAQYMNLAR KDDCFGRLVS FSSPALGRAA
YAKKNFPADH KWNKLDFACG DMNTSIIKTT MGRTVLVEWD ETSPRPYSRL NLIQGTLGTL
AGFPTRVAGE KLGNGNYHEW IEGKEKLAPI FEKYDHPLWK RIGPLALKMG GHGGMDFVML
FRIIECLRNG EPMDQNVYEG AFWSSVSELS EYSVAQGGMP QVFPDFTRGD WKTTAPLGIV
Q
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