| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0011 |
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| Symbol | |
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| ID | 6275234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 13898 |
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| End bp | 16282 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612051 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001876639 |
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| Protein GI | 187734527 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.996124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGAAG ACCTTTTTTC CCTGGCAGCC GGCAAACAGC CTTCACAGCA GGCAACAAAT
GAAACGGCAC CCCGGGCCGG GGAGGCGCGG GAAAATGCCG GCACCGACCA CCCCGGAAAC
GCGGAGGACC CCGCTCACCG CCGCATAGAC TATTTGCGTT CCGAACTGCG CCGCCACAAC
CGTCTGTATT ACGAACAGGC GGAACCGGAG ATTTCCGACG CGGAATATGA CGCCCTGTTC
CTGGAGCTGG AAAAATTGGA AAAAGCCCAT CCCGAACTGT CGGATCCGGA CTCCCCCACG
CGCCGCGTAG GCGGCGCCCC TCTCCAGGGC TTCAACCAGA TCAGACATGC GGTGCCCATG
TTGTCTATTG ACGACATTTT TGAGCAGCGG GACGCCCCCG TACCGGATGA AGAACTGGCG
GAATTCTACC ATAAGCTGTC CAGGGCGCTG CAAACGGAGA ACGTGCCCGT CTCCGTTGAG
CCCAAGATTG ACGGAGTGGC CCTTTCCATC ATGTACCGCA ATGGGAAGCT GGCTTATGCG
GCCACGCGCG GAGACGGAGA CGTGGGGGAC GACGTAACGG CCAACGTCCG CACCATCCGC
AGCGTCCCCC TCACCCTCCC CCCCGGCGCG CCGCCCGTGC TGGAAGTGCG CGGGGAAGTC
TTCATGCCCA ATGAAGCCTT TGCCAAACTG AATGAAGAAC GGGACGCCGA CGGGCTCCCC
GCATTCGCCA ACCCGCGCAA CGCCACCGCC GGAACCCTCA AGCAGCTGGA CCCTCGGCAA
GTGGCCGCCC GGCCGCTGGC CTTCCTGGCC CACGGATTGG GCGCGTATGA AGGCCCGGAA
CTCAGGGACG CAAAAGACTT CTGGAACATG CTCCGCCATT GCGGCATCCC CTGCAATGAG
CCGGTGTATT ACACGGACAG CCTGGAATCC ACCCGCCAGG CCGTGCGGGA TATTGACAGG
CTCCGCCATA CGCTCCCCTA CGGCACGGAC GGAGCCGTTA TTAAAATCAG CTCCACGGCT
ACGCGGGAAG CGCTGGGAGC TACGGCTCGC GCGCCCCGCT GGGCGGCGGC GTATAAATTC
CCCCCGGAAC AGAAGGAAAC CACCCTGCTG AATATTGTCG TGCAGGTAGG ACGCACCGGG
GTGCTGACAC CTGTGGCGGA ATTGCAGCCT GTGCTGCTGT CCGGTTCTAC GGTAGCCCGG
GCCACCCTCC ACAACCAGGA TGAAATCGAC CGGAAGGACG TTCGCATAGG CGATACGGTG
CTGGTGGAAA AGGCGGGGGA AATCATCCCG GCCGTTCTGA AAGTGAACCT TTCCAAACGC
CCGCAGGACG CCAGGCCCTA CAGCATCCTG GAAGCCACGA AAGGGCTGTG CCCCGCCTGC
GGCAACCCCA TCATGAAGGA AGAAGGGAAA GTAGCCTGGC GCTGCACCAA CTTCACCTGC
CCCGCGCAGG CCGTCACGGG CATCACCCAT TTCTGTTCCC GGTCCGCTCT GGATGTGGAA
AGCATCGGCT CTTCCGTGGC GGAAGCGCTG AGAAGCTCCG GACTGGCGTC CTCCGCGCTG
GACCTTTTCT CCCTGATGCC GGACCAGCTC GCCAACCTGA ACCTGGGCAC GCCGGAAGAA
CCGCGCCGTT ACGGGGAAAA GAATGCCCGG AAAGCGCTGG ACGCCCTGCA AAACGCGCGA
GGGCTTCCTC TGGAGCGCTG GCTCATCGCC TTCGGCATTC CCCTGGTGGG GGAAGTTGTC
GCCAAGGCGC TGGCGGACAC GCATCCCGAC CTGAAGCATG TGGCGGATTC TCCCTACCTC
CGGGACATCG TCCGCCTGGA TGAACTGGTG GAACAGGCCG CCAAAACCAA CCCCAACACC
CGCGAAAACA AAAAGGCGGT GAAGGAAGGC GCGCTTTCCG CAGAGGCGGT ACAGGAGCGC
CACCAGGAAC TGATGGAGGA AATCGACCGC CTGACCGCTC CCTATCTGGC AACGGGCTAC
CTGCGTAAAA ACACGGCCAA ATTCAGCTAT GGCTCCGAAA TCGGCGTGGC GGCGGCCAAA
TCCCTCCGGA GCTTTTTCGC CTCCGCAGCA GGGAACCATA CCATGGACGT CCTGCACAGA
CTGGGCATCA ATCCCCAATC CCAATCTTAC CGGGCCAGCC TTCTCGAAAT CCCGGCGGGC
TCCCTGTCCG GCAAAACCTT CGTCATCACA GGAACGCTCA GCCATCCGCG GGATTACTTT
GAACAGCTTA TCGCCTCCCA CGGGGGAAAA GCCACCGGAG CCATCTCCAA ATCCACCTCC
TGCCTCCTGG CAGGCAACGG AGGAGGCTCC AAGCGGGACA AGGCCCTCAA ACTGGGCGTG
CCCGTCATTT CCGAGGAAGA CTTCTACAAA ATGATCGGGA ATTAA
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| Protein sequence | MEEDLFSLAA GKQPSQQATN ETAPRAGEAR ENAGTDHPGN AEDPAHRRID YLRSELRRHN
RLYYEQAEPE ISDAEYDALF LELEKLEKAH PELSDPDSPT RRVGGAPLQG FNQIRHAVPM
LSIDDIFEQR DAPVPDEELA EFYHKLSRAL QTENVPVSVE PKIDGVALSI MYRNGKLAYA
ATRGDGDVGD DVTANVRTIR SVPLTLPPGA PPVLEVRGEV FMPNEAFAKL NEERDADGLP
AFANPRNATA GTLKQLDPRQ VAARPLAFLA HGLGAYEGPE LRDAKDFWNM LRHCGIPCNE
PVYYTDSLES TRQAVRDIDR LRHTLPYGTD GAVIKISSTA TREALGATAR APRWAAAYKF
PPEQKETTLL NIVVQVGRTG VLTPVAELQP VLLSGSTVAR ATLHNQDEID RKDVRIGDTV
LVEKAGEIIP AVLKVNLSKR PQDARPYSIL EATKGLCPAC GNPIMKEEGK VAWRCTNFTC
PAQAVTGITH FCSRSALDVE SIGSSVAEAL RSSGLASSAL DLFSLMPDQL ANLNLGTPEE
PRRYGEKNAR KALDALQNAR GLPLERWLIA FGIPLVGEVV AKALADTHPD LKHVADSPYL
RDIVRLDELV EQAAKTNPNT RENKKAVKEG ALSAEAVQER HQELMEEIDR LTAPYLATGY
LRKNTAKFSY GSEIGVAAAK SLRSFFASAA GNHTMDVLHR LGINPQSQSY RASLLEIPAG
SLSGKTFVIT GTLSHPRDYF EQLIASHGGK ATGAISKSTS CLLAGNGGGS KRDKALKLGV
PVISEEDFYK MIGN
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