| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0010 |
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| Symbol | |
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| ID | 6275236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 12257 |
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| End bp | 13873 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642612050 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_001876638 |
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| Protein GI | 187734526 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.886548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATAG CCACGATTGC CGCCCTGGCC GTCACTCTGG GACTTCCCGC CCCGGCCCAG
CAGTCCGCCA CTAAAATCAT TACGGAAAAC GGACAGCCTG CGCTGGCCCT GGACGAACAG
TTCGCAGCCC GGCTGCGCGA CGGCGGAATG AAGCAGGGCT CCCCGGCCAC CGTTCCCGCG
GAATTTTCGG CAGCAGCGCC CGGCCTCCCC CTCCCTGCGG ATGCCAACCA TGCCGCTGTC
AGGGAAACGG CGGGGGAACG CAATCGGCGC ATGGAATGGT GGAGGGATGC CAAATTCGGC
ATGTTCATCC ATTACGGCCT GTATTCCGGA TTGGCCGGGG AATGGAAAGG CAGGCCCGGA
GGTTCCGAAT GGATTCAAAA AAACGTGGAA GTGGATACGG ATACCTACGC CGCGGAAGCT
CTGCCCCTGT TCAAGCCCAG GGAAGGCCTG ACGGAAGAAT GGGCCCAGCT CGCCCGGGAT
GCAGGCTGCC AATATGTAGT GCTCACCAGC AAGCACCATG AAGGCTTCGG CCTGTTTGAC
AGCGCCTTGA CGGATTACGA CGCCAAAAGC GCCGTGAACC GGGATATCAT CCGCGAATAT
GTGGACTCCT GCCGCAAGCG CGGCCTGAAA GTGGGCCTCT ACCACTCCGT TATTGACTGG
CATCACCCGT CCTATGACAA CACCATCTGC CCGGACCTCT GCTACCCTGC GGGACAGGCG
GCAATGCTTA ACAGGAAAAA CATTCCCCGC GACCACGCCG CCTACCAGAA ATACCTGCAC
GCCCAGGTCC GGGAGCTGAT GACCCGTTAC GCGCCCATCG ACATCATGTG GTGGGATTAC
TCCCAGGGAG CCATGGAGGG GGCCAAAGGC TGGAAGGCGC CGGAACTGAT GGACATGGTG
CGCTCCATCA ATCCCGGCGT CATCATGAAC AACCGCCTGT ACGCTTATTC CGGCCTGAAC
AAAAACCAGG CCGGCACGCT GGACCTGCGC TGCGGGGACT ATATTACCCC GGAACGCTTC
ATCCCCCGGC GCGGATATCC CGGCGTGGAC TGGGAATCCT GCATGACGGT AAGCGACAAA
TGGGGCTACA ACCGCTACGA CACCAACATC AAATCTCCGG AAACCATCAT TGAAAAACTG
GTGGAATGCG TTACCAAGGG AGGCAATCTT CTGCTGAACG TCAATCCCAT GGCGGACGGC
ACCATTCCGG AAAAAGTGGC CGCCACCATG CGCGGCGTAG GCCGATGGCT CAACATCAAC
GGTGAAGCCG TGTACGGAAC ACGGGCATTC ATGCAGCTGG ACCAGCCTGC CACCATCAAT
CGGCAGGGGG ATATCTTCAT CTTCCTGATT CCCCCGCCGG ACAAGGAGCC GGCCCAGCCG
CCCAGTGAAG GAACCATGAA AGAATTGACG GCGGGAGCGG AACACGCCCG CATGCAGCCG
CTGGATGCCA CCGGCTACGA AAATGACGGG GGAACAGCCG TCACCCTGCC CGCCGGCTAT
TCCAAAGCAT TGCTTCTGGG AGACAACACC GCCCTTCCCG TCGTCAACGG AACGGTCCTG
TTCAAGGCTC ATGAACATTC CAAAACTCCC TGTTCCGTCA TCAAACTGAG CAAATAG
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| Protein sequence | MNIATIAALA VTLGLPAPAQ QSATKIITEN GQPALALDEQ FAARLRDGGM KQGSPATVPA
EFSAAAPGLP LPADANHAAV RETAGERNRR MEWWRDAKFG MFIHYGLYSG LAGEWKGRPG
GSEWIQKNVE VDTDTYAAEA LPLFKPREGL TEEWAQLARD AGCQYVVLTS KHHEGFGLFD
SALTDYDAKS AVNRDIIREY VDSCRKRGLK VGLYHSVIDW HHPSYDNTIC PDLCYPAGQA
AMLNRKNIPR DHAAYQKYLH AQVRELMTRY APIDIMWWDY SQGAMEGAKG WKAPELMDMV
RSINPGVIMN NRLYAYSGLN KNQAGTLDLR CGDYITPERF IPRRGYPGVD WESCMTVSDK
WGYNRYDTNI KSPETIIEKL VECVTKGGNL LLNVNPMADG TIPEKVAATM RGVGRWLNIN
GEAVYGTRAF MQLDQPATIN RQGDIFIFLI PPPDKEPAQP PSEGTMKELT AGAEHARMQP
LDATGYENDG GTAVTLPAGY SKALLLGDNT ALPVVNGTVL FKAHEHSKTP CSVIKLSK
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