Gene Emin_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1456 
Symbol 
ID6262875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1550592 
End bp1551605 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content36% 
IMG OID642611941 
Productintegrase family protein 
Protein accessionYP_001876341 
Protein GI187251859 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.699839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTTT TTGAAACAGA AAACGGAACA TGGGGTATTG ATTACAGATA TAAAAGCAAG 
CGTTATAAAA GAGTTGTTGC TATAACCAGA AAGCTTGCCT TAGACATTGA GCGTAAAATA
CTAACAGATA TTAAAGAAGG CAAGTTTTTC CCTGATTTAG ATAAGCAAGA TGTTACATTC
GCCGAAATAG CAGAGAGATA TTGGTCTCTT CACGGCAGAA AAACTAGAGG CGCACAAACT
TTTAAATATA CCTTTGACAT AATTCTTTCA CGTTTCGGAC ATATGAAAGT TGCCGATATA
ACGACAGAAG ACATACAAAA ATTTTATAAT GACACTTGGG AAAGGACATC TCCTTCAACT
GCAAACCGCC ACTTTTCTTT ATTCCGCGCC ATAATTAATA AAGCATTAAA CCTCAAATTA
TATAAAGGAC AGAATCCTTG TATTGGAGTA GTGCGACAAC GTGACAATCC ACCCAGAGAC
AAATATTTTA CAAAGGAAGA CATCAAAAGC CTTTTAGTAA CGGCAGAGAA CAGGCTTAAA
CCTATTATTG CTTTTGCAGT ATTAACGGGC TGTCGTAAAA TGGAAATCCT TAATCTTCGC
TGGAAAGATG TAGATTTTTA CGGCGGTATT ATTAGAATTA CAATGTCTAA GTCAGGCAAA
CCGAGAGAAA TCCCATTAGC AAACGATTTA AGACCAATAC TACTAGCCAT GCATACTAAT
CCACAAGATA AAGTATTTAA CATTACAGTG CCCGCATTAA AATATTCTTT TAATAAACTG
CTAAAGAAAC TTGGCTTTGA AGGCTACTGT TTCCACACCT GCCGTCATAC ATTTGCCAGT
CTGTATATGC AAAACGATGG CAATATTACC GATTTACAGC GTATATTAGG CCATGCAACA
ATAGAGCTAA CCATGCGATA TTCACATTTT AGCCCCCAAT ACATTCAGCA AACCATTAAA
GTTATGGATG GAATTATTGC TTTATCTGAA AATAAGCTTT TAGAGCTAAC CTAA
 
Protein sequence
MGVFETENGT WGIDYRYKSK RYKRVVAITR KLALDIERKI LTDIKEGKFF PDLDKQDVTF 
AEIAERYWSL HGRKTRGAQT FKYTFDIILS RFGHMKVADI TTEDIQKFYN DTWERTSPST
ANRHFSLFRA IINKALNLKL YKGQNPCIGV VRQRDNPPRD KYFTKEDIKS LLVTAENRLK
PIIAFAVLTG CRKMEILNLR WKDVDFYGGI IRITMSKSGK PREIPLANDL RPILLAMHTN
PQDKVFNITV PALKYSFNKL LKKLGFEGYC FHTCRHTFAS LYMQNDGNIT DLQRILGHAT
IELTMRYSHF SPQYIQQTIK VMDGIIALSE NKLLELT