Gene Emin_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1365 
Symbol 
ID6263263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1467801 
End bp1468478 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID642611846 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001876252 
Protein GI187251770 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACGA TAATACTGGT AAAACCGAGA AACCCCAATA ACATAGGCGC CTCCGCGCGC 
GCTATGGCAA ATTTCGGGTT AAGCGACCTA AGAATCGCAG GCGCGCATAT CCCTAATTTG
GAGGAAGCGC AAGCTGCCGT CGGGGCTGAG GATTTATTAA AAAAAGCTAA AATTTTTGAC
AATTTGCAAG ACGCTCTTGC CGACTGCAAT TTTGCCTTCG CCGCGACAAG CCTGAAAAAC
AGAAACACAC AAAAAGAAAT TGTTTCGCTG CCAAATATAA ACAACCATAT TAAAAGGGGC
AAAATTGCCG TTGTGTTCGG CTCCGAAAAA ACGGGTCTTA GCGTAAAAGA CATTGAACTT
TGCGACGCTG TTTTAAATAT ACCAACAACA ACAAAACAGC CTTCTGTAAA TTTGGCGCAG
GCGGTTAATC TTGTGTGTTA TGAAACAGCA AAAACAAAAA ATTTTAAAAC TTTAAAACAG
CAAAAAACGA ACCTGCCTTC TTTTAAAGAT ATTGATTTGC TTACCGCTGA TATTTTGGAA
TTATTTGACA GGAAAGAGTT TAAAAAAGAG CTTACAAAAA CTGACCGGGA ACTGCTTATA
AAAAATATTT TAAAAAGTTC GTCATTATCA AAAAAACAGC TTTTTATTAT TAAAAAATTC
CTTAATTTGT TAAAATGA
 
Protein sequence
MITIILVKPR NPNNIGASAR AMANFGLSDL RIAGAHIPNL EEAQAAVGAE DLLKKAKIFD 
NLQDALADCN FAFAATSLKN RNTQKEIVSL PNINNHIKRG KIAVVFGSEK TGLSVKDIEL
CDAVLNIPTT TKQPSVNLAQ AVNLVCYETA KTKNFKTLKQ QKTNLPSFKD IDLLTADILE
LFDRKEFKKE LTKTDRELLI KNILKSSSLS KKQLFIIKKF LNLLK