Gene Emin_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1263 
Symbol 
ID6263400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1364682 
End bp1366277 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content39% 
IMG OID642611742 
Product60 kDa inner membrane insertion protein 
Protein accessionYP_001876150 
Protein GI187251668 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00209254 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATA AGAAATTTTT AATGGCATTT TTAGTGTTTT TTATAGCGCT ATTAATGTAC 
CAGCAATTCT ATGCTTTGCC AAAAGCGCAG GAAGCTAAAG CAAAGCAAGA AGCCTCCTTA
GTTGCAGAAC AAGCAGTAAC CGCTACCAAA AGCAATTCAT CAATTACAAA AACCGCATTA
ACCCCTTCCG ATAAACAAGT TGAAGAAAAG TTTTATGATT TCTCAACCAA AGTGGCCGAT
ATTAAATTCA CGTCAAAAGG CGCGGGCATT AAAGATTATA TTTTTAAAGA CTGCGTAGGA
GACGTTAATT TAACGCCTTA TACTGAGGAA GGTTTTTACA CAACCTTTCC GAGGCTTACC
TTTAAAGAAG CCGGCAGAAC GGAGAACAGT ATAACCTTTA CTGTCGAAGA AGGTTATATA
AGGATAAACA AAACTTATAC CTTTAATGAT GATGGTATAA ATAATTTATC CCTTTCAATA
GAAAACAGAA GTACAAAAGA ACAAACACTG GACCAGTTTT ACTTTAACTT CGGCCCCGGT
ATAGGTACTG TTGAAAGTGA AAAAAGCGAC AACAGCCGCG AAATGAAAGC TGTTTACATT
ACGCAAGAAG AAGGGAAAAA ATTTCCAACC TTTCATAATA GAAGTAAAGA AAAAATTGAA
GATTCCGTTA AGGACGGCAA TTGGATTTGG GCCGGCCTTA ATAACAGATA TTTTCTTGCG
GTTTTAATCC CGCAAAATTG GAAATCGGGT TTATTGGAAA CAGAGAAAGT TATTGTTGAT
TCGCACCCGA GGTTTTTTGG TTTATTAGGT AAAGCCAAAG TGGAAGGCCC CATGCTTAAA
ATTACGGTGC CGGCAATGTC TTTACCTCCG AAATCTAAAA CGGTTTTACA GTCTGATTTC
TATTTCGGGC CTAAAGACTA CAAAACATTC CAGACAATGC CTTATAGTTT GGACAAATCA
ATTGAGTTCG GGTTCTTTGG AGCGCTTGGG AAAATGGTGC GTTGGGTGTT AGAAACATTG
TACAGGTTTA CCGGCAACTA CGGCGTAGCC ATAATAATAC TTGCCGTATT ATTCCAAATT
ACCATGTTAA GGCTTACCAT TATGCAGCAC AAGTCTTCTA TGGTAATGCA AAAAATCCAG
CCGGAAATGA AAAGCATTCA GGAAAGATAT AAAAATGACC AGACCGCGCA GCAACAAGCT
ATGCTTGCTC TTTATAAAAA GCATAAATTT AATCCTTTTA TGGGTTGCTT GCCGCTGCTT
ATACAGCTTC CTATATTCAT TGCGCTTTTT AACGCATTTA GAACATCATG GGAACTTCAC
GGCGCCGGGT TTGTTTGGTG GATTACGGAC TTGTCCGCTA AAGATCCTTT TTATGTTCTG
CCTATAGTTA TGGGCGGCGT AATGTTTATT CAGCAAAGAA TTACAGCTCC CGTAGGCAGC
GATCCGACGC AAACGGCAAT GCTTAAGTGG ATGCCGGTAA TATTTACGTT TGTGTTTATT
AACTTCCCGG CGGGCTTGGT TTTGTATTGG TTAACAAACA GTATTATAAG TTTAGGTATT
CAGCTTTACA TGAAAAGAAA AATGGCAAAA GCTTAA
 
Protein sequence
MENKKFLMAF LVFFIALLMY QQFYALPKAQ EAKAKQEASL VAEQAVTATK SNSSITKTAL 
TPSDKQVEEK FYDFSTKVAD IKFTSKGAGI KDYIFKDCVG DVNLTPYTEE GFYTTFPRLT
FKEAGRTENS ITFTVEEGYI RINKTYTFND DGINNLSLSI ENRSTKEQTL DQFYFNFGPG
IGTVESEKSD NSREMKAVYI TQEEGKKFPT FHNRSKEKIE DSVKDGNWIW AGLNNRYFLA
VLIPQNWKSG LLETEKVIVD SHPRFFGLLG KAKVEGPMLK ITVPAMSLPP KSKTVLQSDF
YFGPKDYKTF QTMPYSLDKS IEFGFFGALG KMVRWVLETL YRFTGNYGVA IIILAVLFQI
TMLRLTIMQH KSSMVMQKIQ PEMKSIQERY KNDQTAQQQA MLALYKKHKF NPFMGCLPLL
IQLPIFIALF NAFRTSWELH GAGFVWWITD LSAKDPFYVL PIVMGGVMFI QQRITAPVGS
DPTQTAMLKW MPVIFTFVFI NFPAGLVLYW LTNSIISLGI QLYMKRKMAK A