Gene Emin_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1260 
Symbol 
ID6263837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1361219 
End bp1362568 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content43% 
IMG OID642611739 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_001876147 
Protein GI187251665 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA CTATTTGTGC GGTAATAACG GGTTCTGGCG GGGCTGTAGC GGTAATACGT 
GTAAGCGGGC CGGAGGCTTG GCAATGCGCC TTAAAACTTA CAAAATCTTC AAACGGACCT
GAGGTAAACC GCGTATATCA CCAAAAGCTT TTTGACGGAG ATTTTTTGCT TGATAAAGCG
CTTGTAACAT ATTTTAAAGC GCCTAAAAGT TTTACCGGCG GAGATACCGT GGAGTTTGCC
TGCCACGCCT CAAATTATAT AAAAGGGCGT TTGTTGCAAA TTCTGTCCGA CATGGGCGTA
CGCCCCGCTA AAAACGGCGA ATTTAGCATG AGGGCTTTTA TCAACGGTAA AATGGACCTT
GTGGAAGCTA ACGGGCTTTG CGATTTAATA GCCTCCGACA ATGCCGCGTC ACACGGTGCG
GCTATGAACA GTATGGAAGG CAAATTATCG GCTGAGTTTA AGAGAATAAA AAATTCTTTA
TCGGAGTTGC TGGCGCAAAT TGAAGTGCGT ATAGACGACG TTGATGAAGA AATGCAGCCT
TTAGACCCCG GCTATACCAA AAAAATTTTA AATGATGTCA AACTCCGCGC GGGTGATTTG
GCATCCACGT TTTCCACAGG TAAATTTGTA AAAGAAGGCA TTAAAGTGGC CATTTTAGGG
GTGCCTAACG CGGGTAAAAG CAGTTTGCTT AACGCTATAG TGGGGTTTGA CCGAGCCATA
GTGTCCGAGC ACAGCGGTAC CACAAGAGAC ACTGTTGAGG AAATAGCGGA TTTTAAAGGA
CATAAAATTA TTTTAACCGA CACCGCGGGA ATAAAAGAAG GCGCGCTTGA TGTGGCCGAA
CGGGAAGGAA TGCGCCGCAG TTTAAACGCG GCCGACAAGT CCGACATTAT TATTTTTACG
GCGGATACTT CTAAAAAGCA TCTGCAGGCT GATCACGAAC TTTGGAATTC TTTAAAAATA
AAAGGCAAAA AAATAATTTT GGCTTGTAAT AAAAAAGATA TTAATTTTAC GCCGCCCGAA
TTTTTGTATG AAGCGGACAA AGTGGTAAAT GTTTCCTCTA AAACAGGCGA GGGCGTTGAG
GAGCTTAAAA ACAGCGTTAT CTCACTTTTA GACGCCGGTG ATATTAAAGC GGATTCTAAT
TTAATTACCT CGGCCGTACA TTATGACATG CTTGTGAAAA CTGAAAAAGA GTTGGAAGAA
GCGCTTAAAG CTTTAAAGAA AGACCTCGGC CTTGAATTTT TGGCCGAGCA TGTAAGAAGG
GCTTTACTGC ACCTTAAAGA AATTATAGGC GAAGTTTACG CCGACGATAT TTTGGGAATA
ATATTTTCAA AATTTTGCGT AGGCAAATAA
 
Protein sequence
MNDTICAVIT GSGGAVAVIR VSGPEAWQCA LKLTKSSNGP EVNRVYHQKL FDGDFLLDKA 
LVTYFKAPKS FTGGDTVEFA CHASNYIKGR LLQILSDMGV RPAKNGEFSM RAFINGKMDL
VEANGLCDLI ASDNAASHGA AMNSMEGKLS AEFKRIKNSL SELLAQIEVR IDDVDEEMQP
LDPGYTKKIL NDVKLRAGDL ASTFSTGKFV KEGIKVAILG VPNAGKSSLL NAIVGFDRAI
VSEHSGTTRD TVEEIADFKG HKIILTDTAG IKEGALDVAE REGMRRSLNA ADKSDIIIFT
ADTSKKHLQA DHELWNSLKI KGKKIILACN KKDINFTPPE FLYEADKVVN VSSKTGEGVE
ELKNSVISLL DAGDIKADSN LITSAVHYDM LVKTEKELEE ALKALKKDLG LEFLAEHVRR
ALLHLKEIIG EVYADDILGI IFSKFCVGK