Gene Emin_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1207 
Symbol 
ID6263324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1304828 
End bp1305574 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content41% 
IMG OID642611685 
Producttype II and III secretion system protein 
Protein accessionYP_001876094 
Protein GI187251612 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4964] Flp pilus assembly protein, secretin CpaC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000846866 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000000291696 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAATA AAAAATTTGC ATCAAAAGTC TGTTTAACAA TTCTAGCAGC ATTACTTGTA 
ATGCCAGGCG CGCTTCATGC CCGCAAAACA AACCTTGTGT CTGTCAGCGC CGATATCGTT
GAGATAAGCG GTTCGATAAA CAGCAATATC GGGTTTTCCT GGTACAATAT ATTTGATTTT
GCGGAAAAAG AAATACCGGG TGTTTTGGAA ATAGGCTCTT TTGAAAGAAA GACGGCTCTT
ACAACAAGGT TAAGACTTAT GGAAAACGAA GGTAAAGCGC AGATACTTTC TAACCCCAAA
ATCGTTACTA GAACAGGTAC AAACGCCAAT ATTTCCGTAG GCGGACAAAT ACCTTTCCCC
GAAGTTAACA ACCAGGGCGT GGGCACAAGC ATGTTAGATT ACGGCGTTAT ATTAAACGTA
ATGCCTACTA TTATTCCAGA ACAAAGCAAT CTTATTAACC TTCAGGTTAA TTTAGAGGTT
TCCGCGCCGG ACTATTCCCG AACGGTTTCA GTCGGCTCAA CAACAGTTCC GTCAATTAAC
AAAAGAAGGG TTGAGACGCA GGTTGAACTT CACAGCGGCG AAACGCTTGT TATAGGCGGA
TTAAAGAGTA GCAGCCGTAA CGTGTCCGTT GACAGAATTC CGCTTTTGGG CAGACTTCCT
TTAATAGGGC TTTTGTTTAG AAACAAAGAT ACTTTAGACG AACAGAGATC ATTGTTCTTA
TTTGTTACAG TAGAAATAGT GGAGTAA
 
Protein sequence
MKNKKFASKV CLTILAALLV MPGALHARKT NLVSVSADIV EISGSINSNI GFSWYNIFDF 
AEKEIPGVLE IGSFERKTAL TTRLRLMENE GKAQILSNPK IVTRTGTNAN ISVGGQIPFP
EVNNQGVGTS MLDYGVILNV MPTIIPEQSN LINLQVNLEV SAPDYSRTVS VGSTTVPSIN
KRRVETQVEL HSGETLVIGG LKSSSRNVSV DRIPLLGRLP LIGLLFRNKD TLDEQRSLFL
FVTVEIVE