Gene Emin_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1161 
Symbol 
ID6263126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1259048 
End bp1259521 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content41% 
IMG OID642611641 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001876050 
Protein GI187251568 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAG GGTTTACATT AATAGAGTTG CTTGTGGTGG TTTTAATTAT AGGCATATTG 
GCCGCTATTG CGTTGCCGCA GTACACCTCC GCGGTAGAAA AAAGCCGAGC TTCCGAAGCA
CTTATATTAG GCAAGAATAT TGTTGATTCT TTACAGCGTT ATAATTTACA AACCGGGGAA
TGGACCAACG ACTTCTCCAA CTTAGATATT GAAATTCCGT CGGGATATAC TGCAAGTGGA
GATTTGGCTA AAAGCAAAAA TTTCAAAATA CAGCTTGACA CTTTGCAAGC AACGCTTCCG
CCTGCTATCA GAATTATAAA GTTGAACTCC GCAGGTTCCA ACACGGACTA CTATTTTTAC
TGGATTGTTG ATAAAAATTA CCGCACATGC AATGTTTTTC CAAACAGTGC CATTGGAATG
CGGTTATGCA AATCTTACGG CGGAGAAGTG GTAAACGGCG CATATGTGTT TTAG
 
Protein sequence
MKTGFTLIEL LVVVLIIGIL AAIALPQYTS AVEKSRASEA LILGKNIVDS LQRYNLQTGE 
WTNDFSNLDI EIPSGYTASG DLAKSKNFKI QLDTLQATLP PAIRIIKLNS AGSNTDYYFY
WIVDKNYRTC NVFPNSAIGM RLCKSYGGEV VNGAYVF