Gene Emin_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1027 
Symbol 
ID6263293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1116718 
End bp1118076 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content41% 
IMG OID642611507 
Productouter membrane efflux protein 
Protein accessionYP_001875917 
Protein GI187251435 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA TTAAACAATG CGGGGCGGCG GTTTTTATTT TAACAGCCGT ATTTTCTTAT 
GCTAAAGACT ATACATTTGA AAACGCTTTA AACCGCACTT TAGCGATTGA TGAAAATATT
TTAGCCGTTC AAAAAGACGT TTACCGCGCG GCGGCGGAAA ACAGGGCCGC TGCGGGACTG
TATTTTCCAA AAATAGGCGT ACAGGGCAAA TACACAAGGA TAAATGACCC TATAGGCATA
GATTTAAATT CTATAAGGGA CGCTATACAG CCGCTTTATC CTCCGTCTGT TATTTTGCCT
GATTTTTACA CTCAGGTTCA AGACGATAAT TTTTTTAAGG CGCAGGCTGT TGCGTCAATG
CCGGTTTTTA CGGGGGGTAA AATAAGGGCG GCTAATATAG CGGCGAAATC TTCTTTAGAA
GAAGCCGTGG CCAAACTTGA CGGCGCGCGC GATAATGTTT TGGTTGATGT AAGTACAAAA
TATTTCCGCG CCATGCTGGC TAAAAAAGTG GTAAAAGTAA GACGCGAATA TATGAACAGC
ACAAGGGAGC ACGCCGATAA CAGCGCAAAA ATGTTTAAAG CGGGTACTAT AGCAAAGGTG
GAAAAAATGT CGGCCGATCT TTCCTATACA CAGGCCAGAA GGGATTTTAA CTCCTCTTTA
AACGACCGGG AACTCGCCTC AGTTATGCTG CAAAGCCTAT TGTCTGAGAG TGAGCCCGTT
AACACGGTTT CAGATTTATT TGTATGCCAT AAAGAGGACG TTGATACTTT GGAATACTTT
AAAAAACTGG CTTTTCAAAA CCACTATTCT TTAAGAATTT TAAATTCTAA AAAGAAAGCG
GCCGACGCCA ATATAAAGGC GCAAAAATCC ACGTTTATGC CTTCCGTTTA TTTATTCGGA
ACGCGCGAAC TGCATGAGCA TGATTTAACT ATTTTAGAAC CGGAATACGC TTACGGCGTA
GGTTTTGAAT GGAATATTTT TGAAGGTTTT GGCGGATACA ACAGAAGCAA AGCCGCAAAA
CGCCAAAGGG AAATGGTTGA TTTCTTAAAA GAAAAACAGT TAAAAGACAT TGATACTTAC
GTAGAACATT TTCATAAAAA AATGTTAAAC GCCGTTTATA ATTATGAGGC TGTGCGTGAG
GAAATTAAAT TTGCCAAAGA ATTTTTAAGA ATGAGAACTT TGGCTTACAA AGCGGGTACG
GGAACCTCTT TAGAAGTAAA TATGGCAAGA ACCCAGCTTT TAAAAGCGGA GTTGGACAGT
TTGTCCGCTT CATACGATTT TGTCGTGTCG CTTTCAAACC TGCTCAGCTT AACCGGGCGG
ACACAGGACT TTGCCAAATA CCAGGGCAAA TGTCTTTAA
 
Protein sequence
MKIIKQCGAA VFILTAVFSY AKDYTFENAL NRTLAIDENI LAVQKDVYRA AAENRAAAGL 
YFPKIGVQGK YTRINDPIGI DLNSIRDAIQ PLYPPSVILP DFYTQVQDDN FFKAQAVASM
PVFTGGKIRA ANIAAKSSLE EAVAKLDGAR DNVLVDVSTK YFRAMLAKKV VKVRREYMNS
TREHADNSAK MFKAGTIAKV EKMSADLSYT QARRDFNSSL NDRELASVML QSLLSESEPV
NTVSDLFVCH KEDVDTLEYF KKLAFQNHYS LRILNSKKKA ADANIKAQKS TFMPSVYLFG
TRELHEHDLT ILEPEYAYGV GFEWNIFEGF GGYNRSKAAK RQREMVDFLK EKQLKDIDTY
VEHFHKKMLN AVYNYEAVRE EIKFAKEFLR MRTLAYKAGT GTSLEVNMAR TQLLKAELDS
LSASYDFVVS LSNLLSLTGR TQDFAKYQGK CL