Gene Emin_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0888 
Symbol 
ID6262677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp976795 
End bp978576 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content37% 
IMG OID642611369 
ProductABC transporter related 
Protein accessionYP_001875780 
Protein GI187251298 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.315462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00000912514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAAAG AAAAAATTAC AGACTCAAGC AGAAGAATTT TTATAAATAC ATTTGTTGAA 
AGCTATAAAA AAATCTGGCC TTATGTTAAG CCTTATAGTT TTAGGGCTTT CCTTGCTCTT
TTGGTAGCAA TTCCGCTAGG CAGTTTAGAC GCTGTGATAG CATGGTTTTT AAAACCCTAT
ACCGATAACG TTATCGTGGC CAGGGACGCC AGCTTCGCGA TTTACATTCC GCTCCTTATT
ATAGGTTTTA CTATAGTACA GGGCGGGTTA AACTATTTTT CCGCTTACCT TAACACCTGG
GTAGGGACAA AGGTTTCAAC CGACTTGGGA CGCGATTTAT ATAAAAAATT GCTTACTATG
GATACGCCCT TTTTTGATAA GGAAAACTCA GGCACCATTG TCCAGCGTTT TTTTAGCGAT
GCTTTTAACG CCACCAATTC ACTTATTTCT AATTTAAGAC ATTTCCTTTC AAAAACATTT
TCATCCATAT CTCTTGTTGT AGTTTTATTT TTAAACTCCT GGCAACTTTC ATTAATAGCG
GTTATAGCGC TTTTAATAGC CTTCCTGCCT ATAAGATATG TAAGAAAAAG AATGAAAAAT
ATTGTTAACA AATCCATAGT AGCCAGCGCC GAAGCTGTAA AAGCGAATAA CGAAACCCAC
GCCGGCAATA AAATTATTTC TGCTTATAAC CTGCAAGATT ATCAAAACAA AAGATATAAC
TCCATTATGG ACACAACTTT TAGTTTGGCT ATAAAAATGG TGCAAACAAC AAACTGGCTT
TCACCCGTTA TGCACATTGT GCTTGGTATA GGCGTAGCCG CAGTTTTGTT TTACAGTAAC
AATCTTATCG TAACAGGCAA GATAACCAGC GGTAACTTCG CTTCATTTTT AGCGGCAATG
CTGCTTTTAT ATACACCCAT AAAAACCATA GGTAACAATG TTGTAGATAT ACAAAAAGCA
TTCCTGGCTA TAGAAAGAAT TTTTGAAATT TTTGAGTTAA AAACAAAAAT AACGGAAGTT
AAAAACCCTG TTGAACTTAT ACGCGTGGAA AAAGAAATTT CTTTTGAAAA CGTTTCTTTT
GAATATGAAC CTAACAAACC AGTTCTTAAA GATATAAATC TTAAAACGGA AGTAGGGCAG
ACAATAGCCT TAGTAGGAAA TTCCGGCGGC GGAAAAAGCA CTTTAGTTAA CCTTATCCCC
AGATTTTACG ACGTGCAAAA AGGCTCAATA AAAATTGACG GCGTTGATAT AAAAAATATA
AGGCTTTTTT CTTTACGAAA CCAGATTTCA ATTGTTTTCC AGGATAACTT TTTGTTCTCC
GGAACAATAA GGGAAAATAT TTTACTTGGT AAACTTAACG CCACTGAAGA AGAAATTAAC
AATGCCGTTA AAAGCGCCCA TTTGGACCAT TTTATAGCGT CTCTGCCAAA CGGTTTAGAC
ACTGTTATCG GCGAACGAGG CACAACATTA AGCGGCGGGC AAAGGCAGCG TGTAGGCATA
GCAAGGGCTT TTATAAGAAA CGCCTGTATT GTTATTTTAG ACGAAGCTAC CAGCGCGCTT
GATAATAAAT CGGAAGCGGT TGTACAAAAA GCTATTGATA ATTTAGTTAA AAACAGAACC
GTTTTTGTTA TAGCCCACAG GTTATCAACG GTGCAAAACG CGGACAAAAT TATAGTTCTT
AATGAAGGAA ATATCGTTGA GGAAGGCAAG CATGAAGAAC TTCTTAAAAA CCTTAACGGC
CCTTACTACA CGCTCTATAA CGCCCAGTTT AAACACAAAT AA
 
Protein sequence
MTKEKITDSS RRIFINTFVE SYKKIWPYVK PYSFRAFLAL LVAIPLGSLD AVIAWFLKPY 
TDNVIVARDA SFAIYIPLLI IGFTIVQGGL NYFSAYLNTW VGTKVSTDLG RDLYKKLLTM
DTPFFDKENS GTIVQRFFSD AFNATNSLIS NLRHFLSKTF SSISLVVVLF LNSWQLSLIA
VIALLIAFLP IRYVRKRMKN IVNKSIVASA EAVKANNETH AGNKIISAYN LQDYQNKRYN
SIMDTTFSLA IKMVQTTNWL SPVMHIVLGI GVAAVLFYSN NLIVTGKITS GNFASFLAAM
LLLYTPIKTI GNNVVDIQKA FLAIERIFEI FELKTKITEV KNPVELIRVE KEISFENVSF
EYEPNKPVLK DINLKTEVGQ TIALVGNSGG GKSTLVNLIP RFYDVQKGSI KIDGVDIKNI
RLFSLRNQIS IVFQDNFLFS GTIRENILLG KLNATEEEIN NAVKSAHLDH FIASLPNGLD
TVIGERGTTL SGGQRQRVGI ARAFIRNACI VILDEATSAL DNKSEAVVQK AIDNLVKNRT
VFVIAHRLST VQNADKIIVL NEGNIVEEGK HEELLKNLNG PYYTLYNAQF KHK