Gene Emin_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0800 
Symbol 
ID6263384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp875397 
End bp875900 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID642611277 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875692 
Protein GI187251210 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.346386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC AAAATGGATT TACTTTAATA GAGTTATTAG TGGTGGTGCT TATAATAGGC 
ATATTAGCCG CCATCGCATT ACCGCAATAT CAAAAGGCGG TTATAAAATC ACGCTCGGCT
GAAGGCTATA TAGTAGGCAA AGCCGTATGG CAGGCTGAGC AGGCTTATTA CCTGGCCAAC
GGATACTATT GTTTTGACCC GAATGAGCTT GATATCGACT TCCCGGGGGC TATTCTTGCG
GCCGGGGACA GCGCTTCAAC CTTCGGTAAT ATAAAACTTA AAAATTTTGA TATAAGTCTG
CGCCAGCAGC CCTACCAAAC GGTTGTTGTA AGAAGCATGG GGGGAACCAC GCCCCAGGCG
ATAAGGTATG AAATTATTTT TGGCACTACA GGTACATTTT GCAGACGTAT GGATAATGAC
GCGACAGGCG AAAGTATTTG CAAAACGCTT ACTTCCCAGG CGCCGATAAC CAATATGACC
GGATGGAAGG ACCATCCGAT TTGA
 
Protein sequence
MKIQNGFTLI ELLVVVLIIG ILAAIALPQY QKAVIKSRSA EGYIVGKAVW QAEQAYYLAN 
GYYCFDPNEL DIDFPGAILA AGDSASTFGN IKLKNFDISL RQQPYQTVVV RSMGGTTPQA
IRYEIIFGTT GTFCRRMDND ATGESICKTL TSQAPITNMT GWKDHPI