Gene Emin_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0338 
Symbol 
ID6263521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp363338 
End bp364300 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content36% 
IMG OID642610804 
Productlipooligosaccharide D-glycero-D-manno-heptosyltransferase 
Protein accessionYP_001875234 
Protein GI187250752 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.411882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TTTCCGACAT AAAAAATTTA AAAAACATAT TGATATTAAG AGGCGAAGGC 
TCTTTGGGCG ACGCTATCTT ATCTTCCTGC TGTTACCGTG AATATAAAAA AGCGAACCCT
GAGTTGAAAA TTTCCGTCGC GTGTTACGGC TCCGCTACCG CTTATCTGCA AAACAACAAA
TATATAGATG TTATATACAA AATACCCGCA AGACGTGTTA TCCGCCCAAA CCAACGCTGG
ATAGGACTTA TTTTACTGGG GCTTAGGTTA CGAATTAAAA ATTTTGATCT TATTATAGAT
TCTTCCGCAA AGGATTTTCT TAACTGGCGT CTATTTAAAC TGCTGGCAGG ACGGGGACGG
GAAATTAACG CAAGCTGCCT TTCCGGGGAT TTTTTTAAAA AACCTTTTCA CGCTCAAGAG
CTGGAAAAAG AAATAGCTAA ACTGTTAATA AAGCATGATA TAGATTCTTC TTACGATTTG
CCCGTTGAAC CGGAAACGGA ACAAAAAATA AATTCCCTGT TGGAAGAAAA AGGTATATCC
GAATATATTT TATTAAACCT TTTCGGCTCT ATAGAAGCAA GAAGTTTTAA CCAAGAAACT
TTTGACAAAA TAACAAAACA AATTATTACA AAAAATCCCA ACGCCCAAAT TGTAATTCCC
GGTATGCCCG CGCAAATTGA ACGTGTTAAA ACATGGGCGC AAATTAAAAA CAGCTTTTTA
TTTAAAACTG CAAACGTATT TGAGCTTTTT GAACTTATCA AACGCTCGTC TTTAGTAATT
ACGCCCGATA CTGCGATAAT ACACATAGCA TCGGGATACA AAATAAAAAC TATAGGTTTT
TATAACGCAT ATTCCGCTTA CAACGCCCCT TATAATACGC AAAGTAAAAT TGTTATTACA
GATAAAAACA GCGTTAATAA TTTTAAAACG CAGGACTTTA CCCTCGCGTA TGAACAAATT
TAA
 
Protein sequence
MKNISDIKNL KNILILRGEG SLGDAILSSC CYREYKKANP ELKISVACYG SATAYLQNNK 
YIDVIYKIPA RRVIRPNQRW IGLILLGLRL RIKNFDLIID SSAKDFLNWR LFKLLAGRGR
EINASCLSGD FFKKPFHAQE LEKEIAKLLI KHDIDSSYDL PVEPETEQKI NSLLEEKGIS
EYILLNLFGS IEARSFNQET FDKITKQIIT KNPNAQIVIP GMPAQIERVK TWAQIKNSFL
FKTANVFELF ELIKRSSLVI TPDTAIIHIA SGYKIKTIGF YNAYSAYNAP YNTQSKIVIT
DKNSVNNFKT QDFTLAYEQI