Gene Emin_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0302 
Symbol 
ID6263726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp324068 
End bp325363 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content39% 
IMG OID642610767 
Productouter membrane efflux protein 
Protein accessionYP_001875199 
Protein GI187250717 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.019197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0220531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA ACAATCTTGA AAAAATATCT TTTTTGGCAG TTATATTACT TGTTTCCCCG 
CATATTTTCG CGGCGGAGTA CTTTAGCCGT TTTACTCCTG CGGCGGACGT TACTTTAGAG
CAGGCTATAA GGCTTGGTAT TGAAAATAAT ACCAACCTGC TAAGCGTTGA GCAGAGTATA
ATAATAGCCG AACACAGAGT AAATGAAACT TCGTTTATGC GCTTTCCGCA ATTTGACTTA
ATGGCTTCGG CCACAAAATA TGATTTGGAA TATCCCACAG TTTTACCTGA AAGTATGGGT
TTTAAAGTTT TAAGCCCCCA AAGCGGCCGG AATGATAATT TATACGGCGT AAGAGTGTCT
GCCGTGCAAT ATTTATACTC GGGAGGCAGA ATTTCCGGTT CAATAAAACT TGCGAAAGCG
CAGCTTAAAG AAGAAAAAAG TAAATATGAA ACGGAAAGAA ATAATGTTAT TTTTAACGTA
AAGAATTCTT TTTATAATAT GCTTTACGCG CAAAAAAGGC TTGAAACTGC CGAAGAGGGT
TTTAAAAGAG CACAAAACTA CGCAAAAAAA CAACCTTTAC AAGGCTGGCG GGGAGTAGCG
GTTACCGCGG CGGTTGAAAA GTTCAGAACG GAAGTTTTTG CGGCCAGGCA TGAGTTTAAA
AAAGCTCATT TGGATTTACT TAAAAATTTA AACAAAGAAC TTAACGCCGA AGTTAAAATA
AAAGGTGATT TTAAACCTTT TACGTTTGAA AGCGATTTGT CTAAATTGAC GCTTTGGGCC
ATGCAGTTCA GGCCGGAACT TAAAACCGCT CTTTATGAAC TTGAAGTTTA TAGCATTTAC
ACAAATTTAA GTATAAGCCA AAAATATCCC GATATTATTG TGGGCGCCAG TTTTGAACAG
CTTGGGGATT CTTCTTTAGA AGATACCAAC AAGCAAATAA GTATGGCGGT GCGTTTGCCC
CTTTCATACG GTTTTATAAG CCAGCCCAGG CAAAGAAAAG CACAACAAAA ACAAAGCACG
CTCAGACGCG CCGATCTTGA AGACAGAATA AGAATACAGG TGTCGGAAAA CTTTAGTAAT
TTGACTTTCT GGCAGGCTGA GGTTGTACAA AGGGAAGCAT CTTTGGAAAT TCTGTCTAAA
GAAATAGCCA AAAATGAAAA ACTGGGATCT TTTGGCCAGG AATCTCTTTT AGCGTTGGAA
GCTTACCAAA CCGCTAAATA CTCTTATCTT CAAGCCGTAT TTGAAAACCT TAAATCTAAA
GCAGGCCTTG AATGGGCGGT AGGCCAAGAT TTATAA
 
Protein sequence
MKINNLEKIS FLAVILLVSP HIFAAEYFSR FTPAADVTLE QAIRLGIENN TNLLSVEQSI 
IIAEHRVNET SFMRFPQFDL MASATKYDLE YPTVLPESMG FKVLSPQSGR NDNLYGVRVS
AVQYLYSGGR ISGSIKLAKA QLKEEKSKYE TERNNVIFNV KNSFYNMLYA QKRLETAEEG
FKRAQNYAKK QPLQGWRGVA VTAAVEKFRT EVFAARHEFK KAHLDLLKNL NKELNAEVKI
KGDFKPFTFE SDLSKLTLWA MQFRPELKTA LYELEVYSIY TNLSISQKYP DIIVGASFEQ
LGDSSLEDTN KQISMAVRLP LSYGFISQPR QRKAQQKQST LRRADLEDRI RIQVSENFSN
LTFWQAEVVQ REASLEILSK EIAKNEKLGS FGQESLLALE AYQTAKYSYL QAVFENLKSK
AGLEWAVGQD L