Gene Emin_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0028 
Symbol 
ID6263499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp30205 
End bp32811 
Gene Length2607 bp 
Protein Length868 aa 
Translation table11 
GC content42% 
IMG OID642610491 
Productalanyl-tRNA synthetase 
Protein accessionYP_001874933 
Protein GI187250451 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.812151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCA AAGAAATACG CGCTTCATTT TTAAATTTTT TTAAGTCAAA AGGTTGTACG 
GTTGTAGCTT CAAGCTCCCT TATTCCCCAG GCGGACCCGA CTTTACTTTT TACCTCAGCC
GGAATGGTTC AGTTTAAAGC TAATTTTTTA GGCTTGGATA AAAGCCTTCA CCGTGCCGTT
ACCTGCCAAA AATGCGTGCG CACAACAGAT ATTGACAGCG TTGGTTTTAC AAACCGCCAT
CTTACGTTTT TTGAAATGCT GGGCAATTTT TCTTTCGGTG ATTATTTTAA AGAACAAGCC
ATAAACTGGG CTTGGGAATA TTTAACACAA ACGCTGCAAA TACCGGCGGA AAAACTTTAT
GTAAGCATTT ATAAAGGCGG CATTGCCGAG CGCGATAACG AAGCATATAA TTTCTGGCTT
AAACACCTTC CTAAAGAAAA AATTTTTGAA CTGGGCGAAA AGGATAATTT TTGGACAATG
GGCCCCACGG GTCCCTGCGG CCCGTGTTCT GAAATTTATT ATGATTTTGG CGATAAAGGC
TGCAAAAACA AAAACTGCAA CATCGAGTGC GACTGCGGCC GGTTTGTTGA GATTTGGAAC
ATTGTTTTTA CCCAATTTGA CAGAAAAGAC GACGGTTCCA TAGTGCCCCT TTCGCAAAAA
AACATTGATA CCGGCATGGG GCTTGAACGC CTTGTAATGG CCATGCAAAA TGTACAAAGC
CCTTTTGAAA CGGACCTTTT TACCCCTACA ATTAACGAAG CAAAAAAATT ATTGAAAATT
GAAGGGAAAA TAAAAGAGGA AATATCCACT TTAAGAATAG TGTCAGATCA TATAAGAAGC
TCAGTCTTTT TAATATCGGA AGGTATTTTA CCTTCTAACG AAGGCCGCGG GTATATTTTA
CGCCGCTTAA TACGCCGCGC TTTAAGATAC GGCAAATTAG CCGGCGTTAA AGGCCCTTTT
TTACACCTGC TTGTAAGCGT AATTGATTTG CATTTTGGCG AAATTTACCC TGAAATCAGA
AATAATAAAA ACTATATTTC CTCAGTTATA AAAACGGAAG AAGAGGCCTT TTTTAAAACA
CTTGAAAACG GTGAAGAAAG ACTTGAGGAC ATTATTAAAA AAAGCAAAAA AACTATAAGC
GGCGAAAACG CTTTTTATCT GTACGAAACC TTCGGTTTTC CCGTTGAATT AACTAAAGAA
ATAGCCTTGG CAAAAGGACT TGCTTTAGAT GAAGAATCTT TTGAAAAAGC AAAAAAAGAG
GCACGCGAAA AAAGTCGTTC CTACGCGGAT GAGTTTAGCA AAGAAAAGCT TGTTGTTTTA
CAAAAAATAG AAAACAGTCT TAAAAACACT TTTGTAGGGT ACGAACAAAT ACAAACCAAA
TCAAAAGTCC TTATTGTTTT AAATGATAAA TTTGAGCAGG TAAAAGAACT TTCCGGCCCG
GGCTACGCCG TGCTTGATAA AACGCCTTTT TACGCCACGG GCGGCGGACA GATGGGAGAC
AGAGGGGCCT TTTCCTGGAA AGACGGGCAA GCCCTGGTTT CAACCGCGGA AAAACCTTTA
TCAAACATCA TTTTGCACGC TGTTGAAGTT TCGGGCGTTT TAAAAGAAGG CTCTGAAATT
GAAGTAAAAA TTGACCCGGT TAACCGCAAA AAAACAGCTG CTAACCATAC TGCCGTGCAC
TTAATTAATG AGGCGCTGCG CCAGGTAATA GGCGAAAGCG TGCATCAGGC GGGTTCTTTT
GTATCGGCCG ATGTTTTCAG GTTTGACTAC ACTGCACCGC ACGCGCCTAC CTCTGAACAG
CTTGCCAGAG TGTTTGAAAT GGCAAACAAC GCCGTTATAC GCGCGCATCC CGTTAACTGT
GAAATACGCC CATTAGAGGA CGCTAAAAAA TTAGGTGCGG TTACCCTTGT GGGCGAACAA
TATGCCGACC CTGCCAGATT TGTTATGGTA GGAGCTAACT TTAACGAGCC TTCCTTAAAA
TACAGTTTAG AGCTTTGCGG CGGAACACAC GTTAACAATA CCTCGGAAAT TATTACTGTA
ATACTTATTA AAGAAGGCGC CCTTTCCGCC GGGGTAAGGC GTATAGAAGG CGTTGCCGGC
ATCGCAGCGA TAGACTATTT AAAAGAAAAT ACGCATGCTT TAAGCGCCAT GGCAAAAACG
CTTGAAACTT CTTTAAAAGA AGTGCCCGCC AGAGTCAATT CCGTACTGGA AGATTTAAAA
GCCGCTAAAA AAGAAATAGC CTCTTTAAGG CAAAAACTTT TAACCGGGGG ATCCGGCGGA
ACCCAGGTAA AAGAAGACGT TTTAAACGGG AAGAAAATTA TTTCCATGAA AGCAGAGGGC
GCCAACCCCA AAGAATTAAG AACGCTGGCC GACAGCTTAA GCCAAAAACA TAAAGACGCA
GTAATCGTTA TAGCCGTAGA TAACGGGGAC AGGCGTTCAT TTGTGGTAAA AAAGGCCGAG
GGCAGCAACA CCGACGCCTG CACGCTCGCC AAAGGTTTGG CGGGCAAAAT GGAAGGCAGT
GCCGGCGGCA AGGCTGATTT TGCCCAAGGC GGCTGTAAAG TAACGGATTG GAATGAGTTT
TTAAAAACAA TAAAAGAATT GCTTTAA
 
Protein sequence
MDSKEIRASF LNFFKSKGCT VVASSSLIPQ ADPTLLFTSA GMVQFKANFL GLDKSLHRAV 
TCQKCVRTTD IDSVGFTNRH LTFFEMLGNF SFGDYFKEQA INWAWEYLTQ TLQIPAEKLY
VSIYKGGIAE RDNEAYNFWL KHLPKEKIFE LGEKDNFWTM GPTGPCGPCS EIYYDFGDKG
CKNKNCNIEC DCGRFVEIWN IVFTQFDRKD DGSIVPLSQK NIDTGMGLER LVMAMQNVQS
PFETDLFTPT INEAKKLLKI EGKIKEEIST LRIVSDHIRS SVFLISEGIL PSNEGRGYIL
RRLIRRALRY GKLAGVKGPF LHLLVSVIDL HFGEIYPEIR NNKNYISSVI KTEEEAFFKT
LENGEERLED IIKKSKKTIS GENAFYLYET FGFPVELTKE IALAKGLALD EESFEKAKKE
AREKSRSYAD EFSKEKLVVL QKIENSLKNT FVGYEQIQTK SKVLIVLNDK FEQVKELSGP
GYAVLDKTPF YATGGGQMGD RGAFSWKDGQ ALVSTAEKPL SNIILHAVEV SGVLKEGSEI
EVKIDPVNRK KTAANHTAVH LINEALRQVI GESVHQAGSF VSADVFRFDY TAPHAPTSEQ
LARVFEMANN AVIRAHPVNC EIRPLEDAKK LGAVTLVGEQ YADPARFVMV GANFNEPSLK
YSLELCGGTH VNNTSEIITV ILIKEGALSA GVRRIEGVAG IAAIDYLKEN THALSAMAKT
LETSLKEVPA RVNSVLEDLK AAKKEIASLR QKLLTGGSGG TQVKEDVLNG KKIISMKAEG
ANPKELRTLA DSLSQKHKDA VIVIAVDNGD RRSFVVKKAE GSNTDACTLA KGLAGKMEGS
AGGKADFAQG GCKVTDWNEF LKTIKELL