Gene Bphy_7789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_7789 
Symbol 
ID6249372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010627 
Strand
Start bp561827 
End bp562528 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content52% 
IMG OID642599312 
ProductGntR family transcriptional regulator 
Protein accessionYP_001863718 
Protein GI186474747 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0274244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA TTGCAAAAAC AAAGCTGTTA AGTGCTGGCG CCGTGGACAA GGCATCAGCA 
GTCCGTTATC AGATGTCGGA AATCCACCCG ACGTTGCGTG ATCGGATTTG CAATCTGTAT
TATCCCCCTG GCGCCGTACT AGGAGAGACT GCACTTGCGG ACGAATTCCA GGTCAGTCGC
ACTCCGATCC GGAAAAGTCT TCAGAGGCTC GAGTACGAAG GCCTCGTGGA AATAAGGAAT
GGCGTTGGTA CAATAGTCAG GGGCGGTGAT CTCCGAGAAT GCCGTGACAC CTACGCATTC
TGGCTAAAAT TGAGCGAAAT GCTTGGTGAC TTCTGTTCTC CAGCACACGC TCCCAAAGCG
CTTGAGCGAA TGCAAGGACT GGCCCTCAGA GCGAGGACGC TGCAACGCAA GCCGCCGAAT
TTCGAAGCAT TCTGGGAGAT CCTCCATGAG TTGCATTCCG TAATCAACGG TCTGATAACG
AACGGAGAGG TTCGCCAAAC GCATGACCGC TGTTACTTGC AAGTATCGCG CTTTCGGCTC
AATATTGTGG AACTTTTATG GGACGACGAG GTTAAAAACC TCAACGGAGA GCTAGAGGAA
TGTTGCTTGG CGCTGCGCGC TGGGGACATG CGCGCTCTTG GACTAGTACA ACGGAACTAC
ATTTCGTTCG ATCTCGCACA TATCGCTCGT TTGATCTCAT AG
 
Protein sequence
MALIAKTKLL SAGAVDKASA VRYQMSEIHP TLRDRICNLY YPPGAVLGET ALADEFQVSR 
TPIRKSLQRL EYEGLVEIRN GVGTIVRGGD LRECRDTYAF WLKLSEMLGD FCSPAHAPKA
LERMQGLALR ARTLQRKPPN FEAFWEILHE LHSVINGLIT NGEVRQTHDR CYLQVSRFRL
NIVELLWDDE VKNLNGELEE CCLALRAGDM RALGLVQRNY ISFDLAHIAR LIS