Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7789 |
Symbol | |
ID | 6249372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010627 |
Strand | + |
Start bp | 561827 |
End bp | 562528 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642599312 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001863718 |
Protein GI | 186474747 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0274244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCA TTGCAAAAAC AAAGCTGTTA AGTGCTGGCG CCGTGGACAA GGCATCAGCA GTCCGTTATC AGATGTCGGA AATCCACCCG ACGTTGCGTG ATCGGATTTG CAATCTGTAT TATCCCCCTG GCGCCGTACT AGGAGAGACT GCACTTGCGG ACGAATTCCA GGTCAGTCGC ACTCCGATCC GGAAAAGTCT TCAGAGGCTC GAGTACGAAG GCCTCGTGGA AATAAGGAAT GGCGTTGGTA CAATAGTCAG GGGCGGTGAT CTCCGAGAAT GCCGTGACAC CTACGCATTC TGGCTAAAAT TGAGCGAAAT GCTTGGTGAC TTCTGTTCTC CAGCACACGC TCCCAAAGCG CTTGAGCGAA TGCAAGGACT GGCCCTCAGA GCGAGGACGC TGCAACGCAA GCCGCCGAAT TTCGAAGCAT TCTGGGAGAT CCTCCATGAG TTGCATTCCG TAATCAACGG TCTGATAACG AACGGAGAGG TTCGCCAAAC GCATGACCGC TGTTACTTGC AAGTATCGCG CTTTCGGCTC AATATTGTGG AACTTTTATG GGACGACGAG GTTAAAAACC TCAACGGAGA GCTAGAGGAA TGTTGCTTGG CGCTGCGCGC TGGGGACATG CGCGCTCTTG GACTAGTACA ACGGAACTAC ATTTCGTTCG ATCTCGCACA TATCGCTCGT TTGATCTCAT AG
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Protein sequence | MALIAKTKLL SAGAVDKASA VRYQMSEIHP TLRDRICNLY YPPGAVLGET ALADEFQVSR TPIRKSLQRL EYEGLVEIRN GVGTIVRGGD LRECRDTYAF WLKLSEMLGD FCSPAHAPKA LERMQGLALR ARTLQRKPPN FEAFWEILHE LHSVINGLIT NGEVRQTHDR CYLQVSRFRL NIVELLWDDE VKNLNGELEE CCLALRAGDM RALGLVQRNY ISFDLAHIAR LIS
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