| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7756 |
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| Symbol | |
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| ID | 6249339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010627 |
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| Strand | - |
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| Start bp | 522266 |
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| End bp | 527695 |
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| Gene Length | 5430 bp |
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| Protein Length | 1809 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642599286 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001863692 |
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| Protein GI | 186474721 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTC AACGCTTTTC CGAAAATCGA AATAACCGCC AAGTCCTCTG GGAGGACGCG
GACCGTGTCC TCTGTCGGGT TTGTCAATCT CGCGGCAGCG AAAGCGTTCT GGTTGTACAG
ACCACGGCGG CGAATCCCTC AGCCGACACC ATCCTTCGTC TCACGCATGA ATTCGAGCTG
AAGGAGAAAC TCAACAGCAC ATGGGCGGTA CGGCCGATAG ATCTGATTCG CGGAGAAGGC
CGGACTGTAT TGGTGCTCGA AGACCCGGGC GGCGAGCCGC TCGAACGGAT GATCGGCGCG
CCGATGGAAA TGGGAACTGT TTTACACGTT GCCATCGGCA TTGCTGAAGC GCTGGGCAAA
CTCCACCAGC GCGGTTTCGT CCATAAGGAC CTCAAGCCCG CTCATATTCT GACAAACTGT
GCGGATGGTT TCTTGCGGCT CACCGGCTTC GGCATCGCTT CAGAACTGCC CCGCGAGCGT
CAATCCCCAG TGCCACCTGA GACGATTGCG GGCACGCTGG CATATATGGC GCCCGAACAG
ACAGGGCGAA TGAACCGCTC GATTGATTCC CGAAGTGACC TCTACTCATT TGGCGTTGTG
CTCTACCAGA TGCTCACCGG TGTATTGCCG TTCAATGCCG ACGATCCGTT GGAATTGGTG
CACTGCCACG TTGCTCGCAA GCCGATGGCG CCGAACGCGC GGGCGGGGAG AATTCTGCCC
GTCGTCTCGG AAGTAGTTAT GAAGCTGCTC GCGAAAACGC CCGAGGAGCG CTATCAGACC
GCAGCCGGTG TGGAACGTGA CCTCCGACGT TGTCTCACCG AATGGGAGCG ACAGCGGCAC
ATCGAAGTCT TTACGCTCGG CGAGCACGAT ACGCCTGATC GGCTGTCGAT TCCCAATAAA
CTTTATGGTC GGCAACGTGA GATCGACGCT CTGGTCGCGG CGCTTGACCG CGTCATCGCT
AGGGGCACAC CGCGATTGGT GCTGGTTTCC GGTTATTCGG GCATTGGTAA GTCGGCGATC
GCGAATGAGC TACAGAAGGT GCTCGTGCCG TCACGAGCAC TCTACACGTC GGGTAAGTTC
GACCAATACA AGCGCGACAT ACCGTACTCG ACACTGCTGC CCGCTTTTCG TGATCTGGTG
CGCCGGCTTC TCACCCTGCG AGAGACGGAA CTGGCGATTT GGCGCGAGGC GTTCGTGGAG
GCACTGACGC CAAACGCGCG ACTCGTGACT GACCTACTCC CCGAGCTTAA GCTCGTCATC
GGCGACCAGC CGCCCGTCCC CGAACTGGAT TTGCATCAGG CACAACGCCG TTTCCAGCTA
GCCTTCCGGC GGTTCGTGAG TGTCTTTGCC CGGCAGGAAC ATCCGCTGGT GCTGTTTTTC
GATGACCTCC AATGGCTCGA TACCGCGACG CTGGACCTGT TGCAGGATTT TCTAACCTGC
CCGGATCTGA AGTATCTGAT GATCATTGGC GCGTATCGAA GCAACGAGGT AGACACCAAT
CATCCGCTGA TGAGTAAGCT TCAGGCATTC AGGAGCATGG GCGCGGCGGT TGACGAGATC
GCGCTTCTAC CGCTTACCCG CGAGCACGTG GAGCGATTGA TTGCAGAAGC GCTCCACACA
ACGCCGGAAC GGGTCTCGCC ACTTGTGCAG CTCATACATG ATAAGACTGG CGGTAATCCG
TTTTTCGTCA TTCAATTTCT ACACGCACTC GCCGACGAGC ATTTACTCAC TTTCGACCAC
AACCTGGCCT GTTGGCAGTG GCGTCTGCCA CAAATTCGCA CAAAGGGCTA CACGGACAAC
GTGGCAGACC TGATGGTCGT AAAGCTGGCC CGCCTCCCTG CCGAAACGCG GCGGGCATTG
CGACTGCTCG CCTGTCTCGG CAATACCGCA ACGCTCGGGA TTCTGTCGAA AATGTTGGGG
AAAACCAAGC AAAGTGTGCG CACGTCGCTG ATACCAGCGG TACACAAGGA GCTTGTCGAT
GATCTGGGAG ATGCCTACAG GTTTGCGCAC GACCGGGTGC AGGAAGCTGC CTATTCGCTG
ATCCCAGAAG GCTTGCTTCC AAAGGTCCAT CTGCGTATCG GGCGCCTGCT CGCGACACAA
ACCTCTCCCG AGAAGCGCGA GCAGGCGATA TTCGATATCG TCAGTCAACT CAACCGCGGG
ACAGCGCTGA TGGATGATCA GGAGGAACGC GACCAACTTG CTGCATTCAA CCTGATAGCC
GGCCAGCGCG CCAAGACGTC GACGGCCTAC GAATCAGCGC TCACTTATCT CATCATGGGT
GCGCAACTCC TAGCCGACGA CCGCTGGGAG CGCAAGCACG AACTCATCTT CACACTCGAG
TTAACTCGAG CCGAATGCGA ATTCCTGACC GGTCGACTGT CGAACGCAGA GCAACGCTTG
AACGTGCTGT CACTTCGCGC AACACGTATC ATCGAACAGG CGATCGTCAC ATGCCTGCAA
ATGGACGTTT ACCTGACTCT TGATCAGAGC GATCGTGCAG TCGCTGTTTG CCTCGAACAT
CTCCGTCGCG TCGGGATTCA TTGGTCAGCC CATCCTAGTG AAGAAGAAGT ACAACGGGAG
TACGAGCGCA TCTGGATCCG GCTTGAGGGT CGAGTGATAG AGGACCTCAT CGACTTGCCA
CTAATGAAGG ACCCAGATTC TCTTTCGACG GCTGATGTGC TGAGCAAGCT CTTGCGCCCA
GCATGGTTCA CGGACGCGAA TCTGGCCTCG CTGACGATAT GCAAAGCGGT CAGTCTCAGC
CTGGAGCATG GCAACTGCGA CGCGTCCTCT TTCGCGTATG TTATGTTTGC ACGGATAGCG
GGACCGCGGT TTAACGACTA TCAAAAAGGG TTCAAGTTTG GCGATCTCGG CTACAGGCTC
GTCGAACAAC GCGGCCTCAA GCGCTTTCAG GCGGTCACGT ATCTTTGCTA TGCGCTTTAT
GTCGCGCGCT GGACGAAACA CGTGCGGATG AGCCGTGAGG TGCTGGATAA TGCATTCAAG
GCGGCGAATC GAATCGGAGA CCTGCCGTCT GCCGCCTACA CGTGCTGCCA TGTCATTTCC
AACCTGCTGT TTGTCGGCGA GCCATTAGGC GCGGTGGAGC ATGAAGCCGA ACAGGGCCTA
GTCTTTTCCG AAAAGACGGG CTTTGGCATG GTTGTCGATA ACCTGAGCAC GCAGCTCGCG
CTAATTCGAA TGCTCCGCGG CTCAACACTC CGATTTGGGA GCCTCGATGA CCGCAACGTC
AATGAACCTC GCTTCGAGCA TCGTTTGTCG GGCAACCCCG CGCTGGCGAC CGCTGCGTGC
TGGTACTGGA TCAGGAAATT GCAGGCACGC TATATTGCCG GCAACTACGC GGAAGCTGTT
GACGCTGCAG GGACGGCGCA ACAACTGCTC TGGACGTCTT CGTCACATTT GGAGGAATGT
GAGTATCACT TCTACGGCGC GCTGGCCCGA GCGGCATATT ACGATCACGT TCCGGCCGGA
GAGCGGCAGG TTTGCCAAGA TGCCATAGCG ACGCATCACC GGCAACTGAA AATCTGGTCG
AAGAACTGCC CCGCAAATTT CACAGATCGC GTGGCGTTGG TCGGTGCCGA GATTGCCCGG
TTGGAAAATC GCGATGTTGA CGCGATGCGG CTCTTTGAAG AAGCCATCGT GTCAGCACGC
GCTAATGGCT TTGTCCATAA CGAAGCTGTA GCGAACGAAC TCGCGTCCCG TTTCTACGCG
ACACGCGGTT TTGAGAAGAT CGCACGCATA TATGCCAAAG AGGCCCGACA GGCCTACCAA
CGGTGGGGTG CCGATGGCAA GGTGCGACAA CTCGACGACC TTCATCCGCA TCTCATGGAC
AAGGAGCGAG CGCCAACGCC AACTACCACT ATCGGGGCGC CCATCGAACA ATTGGACCTC
GCTACCGTGA TCAAGGTATC GCAGGCAATC TCGCGCGAGA TCGTCCTGGA CAATCTGATC
GATACGGTCA TGCGCACGGC GATCGAACAG GCGGGCGCGC AGCGGGGGAT GCTCATCCTA
CCAGACGTCG ACAAACAATG GATAGCGGCT GAAGCTACAA CGGACGGCAA CATGGCTCTC
GTGCAGTTGA GGACTGTGCC CATTAATGCG ACGTTGATGC CCGAATCAGT GCTTTACCAT
GTCTTACGCA CCGGGGAGAG CGTCATCCTC GACGATGCCG CAGAGGACCC TGCATTTAGC
ACGGATCGCT ATATCCGCGA GCATCGGCTG CGTTCTATCG TCTGCTTGCC TCTAACGAAC
CAGGCCAAGC TTACGGGCGT GCTCTATCTC GAAAACAATC TGATCACCCG CGCATTCGCT
CCTGCTCGAA TTGCAGTGCT TCGCCTTCTG GCCTCACAGG CAGCAACATC GCTTGAGAAC
ACTCGCTTGT ATGAGGACCT TACGGAGCGC GAAGCTAGAA TCCGTCGTCT CGTCGACGCA
AACATCATCG GCATCATCGT GTGGAACGCT AATGGCGACA TTCTCGAGGC CAATGACGCA
TTTCTGAGAA TGGTGGGATA CGAGCGCGAG GACCTCGTCT CAGGCCGCAT ACGCTGGAGA
GATCTGACGC CGCAGGAATG GCAAGAGACC ACGCAAGACG CCCTAGCACA GATTTTGCGG
ACGGGGCGCG TGCAGCCATC CGAAAAGGAA TACATTAGAA AGGACGGCAG CCGTGTACCT
GTTATGGTTG GCAGAGTTGC TTTCGAATCC AGTCGGAAAG AAGGCGTCGC CTTCGTGGTC
GACCTGTCAG AGCGAAAAGA AGTGGAGCAC CGCTTGCGGG AATCATACGA GATGCTGCGC
GAACTCACCT CGCGTCGCGA GACGGCACGC GAAGAAGAGC GCAAACGTAT TGCACGTGAA
ATGCACGACG AACTCGGGCA GCATCTCACC GCACTTCGCC TAAGACTCTC TGCTTTGCAG
ATGAAACTGT ACACTGACTG TCCGAAGCTT GTCGAGCAGA CGCAGGCACT GGTTTCTCTC
GTGGACCAAA CAATGCAAGT TGTACGGGGC GTCATCACAT CGCTACGCCC AGCCGCGCTG
GACACAGGCA TCGTGGCCGC ACTCGAATGG CTCGCTGCCG AGTTCAATCG CAATCGACGT
ATAGAGTGTC GCCTGCTCGT GCACGATGAG AACATCGCAA TGGACGAGGA CCGGGCTATC
GTGCTGTTTC GCCTGGTTCA GGAGGCACTG ACCAACGTCT CTCGTCATGC GAAAGCCACG
AGGGTGGTCA TCACGCTTGA GCGGACGGCT AATGCTTACC TTCTCGAAGT ACGCGATGAC
GGCGAAGGTT TCGACGTTCA GGCTGCCCGA AAGAAATCCT TTGGCCTGGT GGGAATGGAA
GAGCGCGTTC TGATGCTCGG CGGCCAAATC GAAATTGTCA GTTCACCGGG TGCCGGAGCT
GTAATAAAAG CGAGCCTGCC TGATAGTTAG
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| Protein sequence | MNVQRFSENR NNRQVLWEDA DRVLCRVCQS RGSESVLVVQ TTAANPSADT ILRLTHEFEL
KEKLNSTWAV RPIDLIRGEG RTVLVLEDPG GEPLERMIGA PMEMGTVLHV AIGIAEALGK
LHQRGFVHKD LKPAHILTNC ADGFLRLTGF GIASELPRER QSPVPPETIA GTLAYMAPEQ
TGRMNRSIDS RSDLYSFGVV LYQMLTGVLP FNADDPLELV HCHVARKPMA PNARAGRILP
VVSEVVMKLL AKTPEERYQT AAGVERDLRR CLTEWERQRH IEVFTLGEHD TPDRLSIPNK
LYGRQREIDA LVAALDRVIA RGTPRLVLVS GYSGIGKSAI ANELQKVLVP SRALYTSGKF
DQYKRDIPYS TLLPAFRDLV RRLLTLRETE LAIWREAFVE ALTPNARLVT DLLPELKLVI
GDQPPVPELD LHQAQRRFQL AFRRFVSVFA RQEHPLVLFF DDLQWLDTAT LDLLQDFLTC
PDLKYLMIIG AYRSNEVDTN HPLMSKLQAF RSMGAAVDEI ALLPLTREHV ERLIAEALHT
TPERVSPLVQ LIHDKTGGNP FFVIQFLHAL ADEHLLTFDH NLACWQWRLP QIRTKGYTDN
VADLMVVKLA RLPAETRRAL RLLACLGNTA TLGILSKMLG KTKQSVRTSL IPAVHKELVD
DLGDAYRFAH DRVQEAAYSL IPEGLLPKVH LRIGRLLATQ TSPEKREQAI FDIVSQLNRG
TALMDDQEER DQLAAFNLIA GQRAKTSTAY ESALTYLIMG AQLLADDRWE RKHELIFTLE
LTRAECEFLT GRLSNAEQRL NVLSLRATRI IEQAIVTCLQ MDVYLTLDQS DRAVAVCLEH
LRRVGIHWSA HPSEEEVQRE YERIWIRLEG RVIEDLIDLP LMKDPDSLST ADVLSKLLRP
AWFTDANLAS LTICKAVSLS LEHGNCDASS FAYVMFARIA GPRFNDYQKG FKFGDLGYRL
VEQRGLKRFQ AVTYLCYALY VARWTKHVRM SREVLDNAFK AANRIGDLPS AAYTCCHVIS
NLLFVGEPLG AVEHEAEQGL VFSEKTGFGM VVDNLSTQLA LIRMLRGSTL RFGSLDDRNV
NEPRFEHRLS GNPALATAAC WYWIRKLQAR YIAGNYAEAV DAAGTAQQLL WTSSSHLEEC
EYHFYGALAR AAYYDHVPAG ERQVCQDAIA THHRQLKIWS KNCPANFTDR VALVGAEIAR
LENRDVDAMR LFEEAIVSAR ANGFVHNEAV ANELASRFYA TRGFEKIARI YAKEARQAYQ
RWGADGKVRQ LDDLHPHLMD KERAPTPTTT IGAPIEQLDL ATVIKVSQAI SREIVLDNLI
DTVMRTAIEQ AGAQRGMLIL PDVDKQWIAA EATTDGNMAL VQLRTVPINA TLMPESVLYH
VLRTGESVIL DDAAEDPAFS TDRYIREHRL RSIVCLPLTN QAKLTGVLYL ENNLITRAFA
PARIAVLRLL ASQAATSLEN TRLYEDLTER EARIRRLVDA NIIGIIVWNA NGDILEANDA
FLRMVGYERE DLVSGRIRWR DLTPQEWQET TQDALAQILR TGRVQPSEKE YIRKDGSRVP
VMVGRVAFES SRKEGVAFVV DLSERKEVEH RLRESYEMLR ELTSRRETAR EEERKRIARE
MHDELGQHLT ALRLRLSALQ MKLYTDCPKL VEQTQALVSL VDQTMQVVRG VITSLRPAAL
DTGIVAALEW LAAEFNRNRR IECRLLVHDE NIAMDEDRAI VLFRLVQEAL TNVSRHAKAT
RVVITLERTA NAYLLEVRDD GEGFDVQAAR KKSFGLVGME ERVLMLGGQI EIVSSPGAGA
VIKASLPDS
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