| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7728 |
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| Symbol | |
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| ID | 6249311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010627 |
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| Strand | + |
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| Start bp | 498521 |
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| End bp | 500164 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642599258 |
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| Product | transcriptional regulator NifA |
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| Protein accession | YP_001863664 |
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| Protein GI | 186474693 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCATT TTCATCTCAA CGATAGTCTT CCAGATTTCG ATGTAGTCTA CGAAGTAGTA
AAGACGCTAG TCTCGTCCCG TGACGCCGAG CGGACGTTGG ACAAGTCGCT GCGTTATCTG
TCATATGCGC TCGGATGGCG CTCGGCGTTC ATCGCCGTCA CGGAACCGGA CGGACATCTG
TGCAGTTTGT GCAGCACTGG GTTGTCAGAG GGCTGGCGCG ACCGCGCGCG CTTCCTGTCC
GGAGAGGGGA TCGTAGGACG GTTGCACTCG AGCGACGCGG CAGTGGTTGT GCCTGAGCTG
AATGAAGAAC CGCTTTTCGC GGACGACATC GGAGCCGTCG GTGGATCCGA GGGTGAACAT
GTCGCTCTGC TCGGGACTCC GATCCGGCAC GAAGGGCGGC CGCTCGGCGT GCTTGTGGCT
TTTTGCGAGA ATCCGGACGG CAAGCGTACT TTCGGCGATG ACCTTCAGCT TATGAAGATT
GTAGCGGCGC CGATGGCACA GGCGCTGCTG CTTCATCGGG ACGAGAAGGC CATGCACGAC
GGCGCAGAGC CGGTCAGGCG CCCGCGTAAG GAAACCATTC GTGCATATCA GATCGATAAC
ACGATCGGTG CGTCGGCGGC GATGCAGCAG GTATTCGCGC AGGTCCATCA AGTGGCGCCG
GCGAGAACGA CGGTGCTGTT GCGGGGCGAG AGCGGTACGG GCAAGGAATT GATCGCGCGT
TCAATCTGTC GTCTATCCCC GCGCAAGGAG CAGCCATTCA TCGCGGTGAA TTGTGCGGCG
CTCACGGAAA CGCTGCTCGA AAGCGAGTTG TTCGGCCACG AGAAGGGCGC GTTCACTGGG
GCGCAATCTC AACGCAAGGG GCGTTTCGAG CTAGCGCACG GCGGGACACT TTTCCTCGAC
GAAATCGGCG ATATCTCTTC GTCCTTCCAG GCGAAGCTCT TGCGCGTTTT GCAAGAGCGG
GAGTTCGAAC GGGTAGGTGG CGCGACGCCG GTAAGAGTTG ACGTAAGGCT GATTGTTGCG
ACGAATCGCA ATCTGGAACG AATGGTGAGG GACGGGGAGT TCCGCGCGGA TCTGTATTAC
CGCATCAACG TGGTAAGTAT TCTTTTGCCG CCGCTGCGCG AGCGTCGCGA AGACATTCCG
GCGATGGCAC AGTATTTCCT CGATCGTTTC AACCGCGACA ACGGTCGCTT ACTGCGCTTC
AGCGACGAAG CATTGCGCGT GCTGTCGAAC TGTTACTGGC CCGGCAACGT GCGGGAACTC
GAGAACTGTG TTGAGCGCAC TGCGACGATG ACACACCATG ACATCATAGA TCGCCTTTCC
TTCCTCTGCG AGATCGACCA GTGCCTGACG AAGGTATTGC ATCACATCGA GCGTGAAGAT
GCTGTGCGTC CCGGTCCCTC GTCGAACCTT GTTGCGAGCG AAGCGCCGAA CGCGCTGGCA
AGTGGCCACG CCGCCGATCT TAACGGCGGC CGGTTCGATG TCCCTGGCGG CGACGGCAGG
CCGGAGGGCG AGCGTGAGCG GCTCGTCTGG GCAATGGAGC GTTGTGGCTG GGTGCAGGCG
AAAGCAGCAC GGCTCCTCGG CATCACGCCG CGGCAGATTG GCTACGCGCT ACGCAAGCAC
GAGATCGAAG TACGTCGCTT CTGA
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| Protein sequence | MPHFHLNDSL PDFDVVYEVV KTLVSSRDAE RTLDKSLRYL SYALGWRSAF IAVTEPDGHL
CSLCSTGLSE GWRDRARFLS GEGIVGRLHS SDAAVVVPEL NEEPLFADDI GAVGGSEGEH
VALLGTPIRH EGRPLGVLVA FCENPDGKRT FGDDLQLMKI VAAPMAQALL LHRDEKAMHD
GAEPVRRPRK ETIRAYQIDN TIGASAAMQQ VFAQVHQVAP ARTTVLLRGE SGTGKELIAR
SICRLSPRKE QPFIAVNCAA LTETLLESEL FGHEKGAFTG AQSQRKGRFE LAHGGTLFLD
EIGDISSSFQ AKLLRVLQER EFERVGGATP VRVDVRLIVA TNRNLERMVR DGEFRADLYY
RINVVSILLP PLRERREDIP AMAQYFLDRF NRDNGRLLRF SDEALRVLSN CYWPGNVREL
ENCVERTATM THHDIIDRLS FLCEIDQCLT KVLHHIERED AVRPGPSSNL VASEAPNALA
SGHAADLNGG RFDVPGGDGR PEGERERLVW AMERCGWVQA KAARLLGITP RQIGYALRKH
EIEVRRF
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