Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7530 |
Symbol | |
ID | 6249114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010627 |
Strand | - |
Start bp | 303063 |
End bp | 303914 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642599110 |
Product | VirB8 family protein |
Protein accession | YP_001863516 |
Protein GI | 186474545 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.587381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0751978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATCGG TAATCAGACA GTGGCTCGCG GCTGGCGTGG GCTCGCGCAA GCGCGCCCCG ACGCCGCCCA TATCGGCCGC GCACCTGGAG GCAGCAGCGC GTGCGGTCGA CCGGTCACAG CGTGACGCGG TCAGCTGGTA TCTCGACCAG GCCCGGGAAT TCGAGAGGTC GAAGATGGAG ATGGCGGAAG AAAAGGCGCG CGTGGCCGAC CGGCGATCAG TGCTTTCGGG TGGCATCGCC CTCGCGGCTG TTTTTGGCAT AACAGCTTTA GGACTACTTA AAAGACCCAA TCCACCGGCG GTGTTGCGGG TGAACGACAC GACCGGCAAG GTGGATGTGC TGCCAACGAC CGCGAACGGC CACGTGAGCT TCACTGAAAA AACCGACCGC GCGGACCTGC GCCGCTATGT CGAGATGCGC GAGAGCTACG ACTGGGAGAC GATTTCGGAC ATGCACAGCG CGGTGATGTT CATGAGCGAC GATCGTGAAA AGGACGCTTA TGACGCGCTC ATCCGTGGAC CGGCCGGCCC GCTCAAGCTG CTCAAAGACC AGGCGCGCAT CATCGCCCGG GTCGGCTCGA TCACCTTTGT CGGTTCGACG GCGCAGGTGT TCTTCTCTCG GCAGCTGATC CCGTTGAATG TGGCGGCGAA GCGCCCGGAC CCGACCTGGT GGATTGCGAC GGTGGCCTTC ACGCGCGTCG ATGTGCCAGA GAAACAGGAT CAGCAGGACA TCGATCCGGA CGGGTTTCGG TGTACCAGTT ACGAGGTCAC ACGCGATTAC ACCCGCGCGC CAGCGGATGC ATCGCCCGAT CCCGCACCGG CCGCATCGAA GATGCCCGGG AGCGGGCCAT GA
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Protein sequence | MVSVIRQWLA AGVGSRKRAP TPPISAAHLE AAARAVDRSQ RDAVSWYLDQ AREFERSKME MAEEKARVAD RRSVLSGGIA LAAVFGITAL GLLKRPNPPA VLRVNDTTGK VDVLPTTANG HVSFTEKTDR ADLRRYVEMR ESYDWETISD MHSAVMFMSD DREKDAYDAL IRGPAGPLKL LKDQARIIAR VGSITFVGST AQVFFSRQLI PLNVAAKRPD PTWWIATVAF TRVDVPEKQD QQDIDPDGFR CTSYEVTRDY TRAPADASPD PAPAASKMPG SGP
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